SCOPe 2.08: Domain d1xp4d1: 1xp4 D:294-386

Lineage for d1xp4d1 (1xp4 D:294-386)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.105: Penicillin-binding protein associated domain [69188] (1 superfamily)
   sandwich; 6 strands in 2 sheets

4. Superfamily b.105.1: Penicillin-binding protein associated domain [69189] (3 families)

5. Family b.105.1.1: PBP5 C-terminal domain-like [69190] (2 proteins)
   automatically mapped to Pfam PF07943

6. Protein D,D-carboxypeptidase DacA, C-terminal domain [117078] (1 species)

7. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [117079] (1 PDB entry)
   Uniprot P72518 25-393

8. Domain d1xp4d1: 1xp4 D:294-386 [115728]
   Other proteins in same PDB: d1xp4a2, d1xp4b2, d1xp4c2, d1xp4d2
   complexed with iod, so4
   fragment; missing more than one-third of the common structure and/or sequence

Details for d1xp4d1

PDB Entry: 1xp4, 2.8 Å

PDB Description: Crystal structure of a peptidoglycan synthesis regulatory factor (PBP3) from Streptococcus pneumoniae

PDB Compounds: (D:) d-alanyl-d-alanine carboxypeptidase

SCOPe Domain Sequences for d1xp4d1:

Sequence, based on SEQRES records:

>d1xp4d1 b.105.1.1 (D:294-386) D,D-carboxypeptidase DacA, C-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
tlrkivqqgdayqdskapvqdgkedtviavapediyliervgnqssqsvqftpdskaipa
pleagtvvghltyedkdligqgyitterpsfem

Sequence, based on observed residues (ATOM records):

>d1xp4d1 b.105.1.1 (D:294-386) D,D-carboxypeptidase DacA, C-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
tlrkivqqgdayqdskavapediyliervqsvqftpdhltyedkdligqgyitterpsfe
m

Timeline for d1xp4d1:

• d1xp4d1 first appeared in SCOP 1.71
  
• d1xp4d1 appears in SCOPe 2.07