SCOPe 2.08: Domain d1x7db_: 1x7d B:

Lineage for d1x7db_ (1x7d B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.13: Ornithine cyclodeaminase-like [110436] (2 proteins)
   Pfam PF02423; contains additional alpha+beta dimerisation subdomain mostly formed by the N-terminal meander beta-sheet

6. Protein Ornithine cyclodeaminase [117437] (1 species)

7. Species Pseudomonas putida [TaxId:303] [117438] (2 PDB entries)
   Uniprot Q88H32

8. Domain d1x7db_: 1x7d B: [114928]
   complexed with mes, mpd, na, nad, orn

Details for d1x7db_

PDB Entry: 1x7d, 1.6 Å

PDB Description: Crystal Structure Analysis of Ornithine Cyclodeaminase Complexed with NAD and ornithine to 1.6 Angstroms

PDB Compounds: (B:) ornithine cyclodeaminase

SCOPe Domain Sequences for d1x7db_:

Sequence; same for both SEQRES and ATOM records:

>d1x7db_ c.2.1.13 (B:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}
tyfidvptmsdlvhdigvapfigelaaalrddfkrwqafdksarvashsevgvielmpva
dksryafkyvnghpantarnlhtvmafgvladvdsgypvllseltiatalrtaatslmaa
qalarpnarkmaligngaqsefqalafhkhlgieeivaydtdplataklianlkeysglt
irrassvaeavkgvdiittvtadkayatiitpdmlepgmhlnavggdcpgktelhadvlr
narvfveyepqtriegeiqqlpadfpvvdlwrvlrgetegrqsdsqvtvfdsvgfaledy
tvlryvlqqaekrgmgtkidlvpwveddpkdlfshtrgr

Timeline for d1x7db_:

• d1x7db_ first appeared in SCOP 1.71
  
• d1x7db_ appears in SCOPe 2.07