SCOPe 2.05: Domain d1upsb1: 1ups B:19-284

Lineage for d1upsb1 (1ups B:19-284)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families)

5. Family b.29.1.2: Glycosyl hydrolases family 16 [49925] (6 proteins)
   Pfam PF00722
   beta-Glucanase-like

6. Protein GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain [117134] (1 species)

7. Species Clostridium perfringens [TaxId:1502] [117135] (1 PDB entry)
   Uniprot Q934G8 17-420

8. Domain d1upsb1: 1ups B:19-284 [113396]
   Other proteins in same PDB: d1upsa2, d1upsb2
   complexed with ca

Details for d1upsb1

PDB Entry: 1ups, 1.82 Å

PDB Description: glcnac[alpha]1-4gal releasing endo-[beta]-galactosidase from clostridium perfringens

PDB Compounds: (B:) glcnac-alpha-1,4-gal-releasing endo-beta-galactosidase

SCOPe Domain Sequences for d1upsb1:

Sequence; same for both SEQRES and ATOM records:

>d1upsb1 b.29.1.2 (B:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]}
dfpanpiekagykldfsdefngptldrekwtdyylphwckdpesakanyrfengslveyi
tedqkpwcpehdgtvrssaimsfdkswihnfsgttdnhernewrgyttkygyfeirakls
ntgggghqawwmvgmqddtndwfnskqtgeidiletffskkdtwriaaygwndpnfqtsw
tisedkvpsgdptseyhiyamewtptalkfyydnelfkviygspdyemgtilniytdags
gahndvwpkewaidymrvwkpvdgyk

Timeline for d1upsb1:

• d1upsb1 first appeared in SCOP 1.71
  
• d1upsb1 appears in SCOPe 2.04
  
• d1upsb1 appears in SCOPe 2.06
  
• d1upsb1 appears in the current release, SCOPe 2.08