Lineage for d1upsb1 (1ups B:19-284)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 555832Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 555833Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (21 families) (S)
  5. 556263Family b.29.1.2: Glycosyl hydrolases family 16 [49925] (5 proteins)
    Pfam 00722
    beta-Glucanase-like
  6. 556292Protein GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain [117134] (1 species)
  7. 556293Species Clostridium perfringens [TaxId:1502] [117135] (1 PDB entry)
  8. 556295Domain d1upsb1: 1ups B:19-284 [113396]
    Other proteins in same PDB: d1upsa2, d1upsb2
    complexed with ca

Details for d1upsb1

PDB Entry: 1ups (more details), 1.82 Å

PDB Description: glcnac[alpha]1-4gal releasing endo-[beta]-galactosidase from clostridium perfringens

SCOP Domain Sequences for d1upsb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1upsb1 b.29.1.2 (B:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens}
dfpanpiekagykldfsdefngptldrekwtdyylphwckdpesakanyrfengslveyi
tedqkpwcpehdgtvrssaimsfdkswihnfsgttdnhernewrgyttkygyfeirakls
ntgggghqawwmvgmqddtndwfnskqtgeidiletffskkdtwriaaygwndpnfqtsw
tisedkvpsgdptseyhiyamewtptalkfyydnelfkviygspdyemgtilniytdags
gahndvwpkewaidymrvwkpvdgyk

SCOP Domain Coordinates for d1upsb1:

Click to download the PDB-style file with coordinates for d1upsb1.
(The format of our PDB-style files is described here.)

Timeline for d1upsb1:

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Domains from same chain:
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d1upsb2