SCOPe 2.05: Superfamily b.29.1: Concanavalin A-like lectins/glucanases

Lineage for Superfamily b.29.1: Concanavalin A-like lectins/glucanases

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families)

Families:

1. b.29.1.1: Legume lectins [49900] (5 proteins)

2. b.29.1.2: Glycosyl hydrolases family 16 [49925] (6 proteins)
   Pfam PF00722
   beta-Glucanase-like

3. b.29.1.3: Galectin (animal S-lectin) [49932] (9 proteins)

4. b.29.1.4: Laminin G-like module [49944] (7 proteins)

5. b.29.1.5: Pentraxin (pentaxin) [49951] (2 proteins)
   automatically mapped to Pfam PF00354

6. b.29.1.6: Clostridium neurotoxins, the second last domain [49956] (3 proteins)
   automatically mapped to Pfam PF07953

7. b.29.1.7: Exotoxin A, N-terminal domain [49962] (1 protein)
   automatically mapped to Pfam PF09101

8. b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains [49965] (1 protein)

9. b.29.1.9: Leech intramolecular trans-sialidase, N-terminal domain [49968] (1 protein)
   automatically mapped to Pfam PF02973
   automatically mapped to Pfam PF13385

10. b.29.1.10: Glycosyl hydrolase family 7 catalytic core [49971] (2 proteins)
    contains many insertions in the common fold
    automatically mapped to Pfam PF00840

11. b.29.1.11: Xylanase/endoglucanase 11/12 [49978] (3 proteins)

12. b.29.1.12: Calnexin/calreticulin [69236] (1 protein)

13. b.29.1.13: Lectin leg-like [74904] (4 proteins)
    mammalian protein related to legume lectins
    automatically mapped to Pfam PF03388

14. b.29.1.14: vp4 sialic acid binding domain [74907] (2 proteins)
    automatically mapped to Pfam PF00426

15. b.29.1.15: Trypanosoma sialidase, C-terminal domain [82038] (1 protein)

16. b.29.1.16: Thrombospondin C-terminal domain [101643] (1 protein)
    Pfam PF05735

17. b.29.1.17: Hypothetical protein YesU [101646] (1 protein)
    automatically mapped to Pfam PF09224

18. b.29.1.18: Alginate lyase [101649] (3 proteins)
    members have same function and similar structures but low sequence similarity
    automatically mapped to Pfam PF08787

19. b.29.1.19: Glycosyl hydrolases family 32 C-terminal domain [101652] (2 proteins)
    Pfam PF08244
    flat sheet beta-sandwich lacking the characteristic beta-bulge in the C-terminal strand

20. b.29.1.20: Peptidase A4 [101656] (3 proteins)
    circular permutation of the canonical fold

21. b.29.1.21: Alpha-L-arabinofuranosidase B, N-terminal domain [110143] (2 proteins)
    automatically mapped to Pfam PF09206

22. b.29.1.22: SPRY domain [141154] (6 proteins)
    Pfam PF00622

23. b.29.1.23: Beta-D-xylosidase C-terminal domain-like [141161] (1 protein)

24. b.29.1.24: SO2946-like [141167] (1 protein)

25. b.29.1.25: MAM domain [141170] (1 protein)
    Pfam PF00629

26. b.29.1.0: automated matches [191363] (1 protein)
    not a true family

More info for Superfamily b.29.1: Concanavalin A-like lectins/glucanases

Timeline for Superfamily b.29.1: Concanavalin A-like lectins/glucanases:

• Superfamily b.29.1: Concanavalin A-like lectins/glucanases first appeared (with stable ids) in SCOP 1.55
  
• Superfamily b.29.1: Concanavalin A-like lectins/glucanases appears in SCOPe 2.04
  
• Superfamily b.29.1: Concanavalin A-like lectins/glucanases appears in SCOPe 2.06
  
• Superfamily b.29.1: Concanavalin A-like lectins/glucanases appears in the current release, SCOPe 2.08