SCOPe 2.01: Domain d1sxje2: 1sxj E:4-255

Lineage for d1sxje2 (1sxj E:4-255)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.20: Extended AAA-ATPase domain [81269] (29 proteins)
   fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain

6. Protein Replication factor C5 [110574] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110575] (1 PDB entry)
   Uniprot P38251

8. Domain d1sxje2: 1sxj E:4-255 [106090]
   Other proteins in same PDB: d1sxja1, d1sxja2, d1sxjb1, d1sxjb2, d1sxjc1, d1sxjc2, d1sxjd1, d1sxjd2, d1sxje1, d1sxjf1, d1sxjf2, d1sxjg1, d1sxjg2, d1sxjh1, d1sxjh2
   complexed with adp, atg, mg

Details for d1sxje2

PDB Entry: 1sxj, 2.85 Å

PDB Description: crystal structure of the eukaryotic clamp loader (replication factor c, rfc) bound to the dna sliding clamp (proliferating cell nuclear antigen, pcna)

PDB Compounds: (E:) Activator 1 40 kDa subunit

SCOPe Domain Sequences for d1sxje2:

Sequence, based on SEQRES records:

>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
wvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgp
gvyrlkidvrqfvtasnrklelnvvsspyhleitpsdmgnndriviqellkevaqmeqvd
fqdskdglahrykcviineansltkdaqaalrrtmekysknirlimvcdsmspiiapiks
qcllircpapsdseistilsdvvtneriqletkdilkriaqasngnlrvsllmlesmaln
nelalkssspii

Sequence, based on observed residues (ATOM records):

>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
wvdkyrpkslnalshneeltnflkslsdqprdlphlllygpngtgkktrcmallesifgp
gvyrnvvsspyhleitpsndriviqellkevaqmeqrykcviineansltkdaqaalrrt
mekysknirlimvcdsmspiiapiksqcllircpapsdseistilsdvvtneriqletkd
ilkriaqasngnlrvsllmlesmalnnelalkssspii

Timeline for d1sxje2:

• d1sxje2 first appeared in SCOP 1.69
  
• d1sxje2 appears in SCOP 1.75
  
• d1sxje2 appears in SCOPe 2.02
  
• d1sxje2 appears in the current release, SCOPe 2.08