Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily) 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest |
Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) |
Family c.68.1.22: Glycosylating toxin catalytic domain-like [159726] (4 proteins) contains Glycosyltransferase sugar-binding region containing DXD motif, Pfam PF04488 |
Protein Cytotoxin L [159727] (1 species) |
Species Clostridium sordellii [TaxId:1505] [159728] (1 PDB entry) Uniprot Q46342 1-542 |
Domain d2vkda1: 2vkd A:1-542 [153218] Other proteins in same PDB: d2vkdb_ complexed with mn, upg |
PDB Entry: 2vkd (more details), 2.53 Å
SCOPe Domain Sequences for d2vkda1:
Sequence; same for both SEQRES and ATOM records: (download)
>d2vkda1 c.68.1.22 (A:1-542) Cytotoxin L {Clostridium sordellii [TaxId: 1505]} mnlvnkaqlqkmayvkfriqedeyvailnaleeyhnmsessvvekylklkdinnltdnyl ntykksgrnkalkkfkeyltmevlelknnsltpveknlhfiwiggqindtainyinqwkd vnsdytvkvfydsnaflintlkktivesatnntlesfrenlndpefdynkfyrkrmeiiy dkqkhfidyyksqieenpefiidniiktylsneyskdlealnkyieeslnkitanngndi rnlekfadedlvrlynqelverwnlaaasdilrismlkedggvyldvdmlpgiqpdlfks inkpdsitntswemikleaimkykeyipgytsknfdmldeevqrsfesalssksdkseif lplddikvsplevkiafannsvinqalislkdsycsdlvinqiknrykilndnlnpsine gtdfnttmkifsdklasisnednmmfmikitnylkvgfapdvrstinlsgpgvytgayqd llmfkdnstnihllepelrnfefpktkisqlteqeitslwsfnqaraksqfeeykkgyfe ga
Timeline for d2vkda1: