Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily) 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest |
Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) |
Family c.68.1.22: Glycosylating toxin catalytic domain-like [159726] (4 proteins) contains Glycosyltransferase sugar-binding region containing DXD motif, Pfam PF04488 |
Protein automated matches [190532] (2 species) not a true protein |
Species Clostridium sordellii [TaxId:1505] [188384] (3 PDB entries) |
Domain d2vkdb_: 2vkd B: [153219] Other proteins in same PDB: d2vkda1, d2vkdc_ automated match to d2bvla1 complexed with mn, upg |
PDB Entry: 2vkd (more details), 2.53 Å
SCOPe Domain Sequences for d2vkdb_:
Sequence; same for both SEQRES and ATOM records: (download)
>d2vkdb_ c.68.1.22 (B:) automated matches {Clostridium sordellii [TaxId: 1505]} lvnkaqlqkmayvkfriqedeyvailnaleeyhnmsessvvekylklkdinnltdnylnt ykksgrnkalkkfkeyltmevlelknnsltpveknlhfiwiggqindtainyinqwkdvn sdytvkvfydsnaflintlkktivesatnntlesfrenlndpefdynkfyrkrmeiiydk qkhfidyyksqieenpefiidniiktylsneyskdlealnkyieeslnkitanngndirn lekfadedlvrlynqelverwnlaaasdilrismlkedggvyldvdmlpgiqpdlfksin kpdsitntswemikleaimkykeyipgytsknfdmldeevqrsfesalssksdkseiflp lddikvsplevkiafannsvinqalislkdsycsdlvinqiknrykilndnlnpsinegt dfnttmkifsdklasisnednmmfmikitnylkvgfapdvrstinlsgpgvytgayqdll mfkdnstnihllepelrnfefpktkisqlteqeitslwsfnqaraksqfeeykkgyfe
Timeline for d2vkdb_: