SCOPe 2.07: Structural Classification of Proteins

PDB entry 5a8k

View 5a8k on RCSB PDB site
Description: methyl-coenzyme m reductase from methanothermobacter wolfeii at 1.4 a resolution
Class: transferase
Keywords: transferase, post-translational modification, binding sites, catalysis, coenzymes, disulfides, hydrogen, hydrogen bonding, ligands, mesna, metalloporphyrins, methane, methanobacterium, models, molecular, nickel, oxidation-reduction, oxidoreductases, phosphothreonine, protein conformation, protein folding, protein structure
Deposited on 2015-07-16, released 2016-08-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-03-29, with a file datestamp of 2017-03-24.
Experiment type: XRAY
Resolution: 1.41 Å
R-factor: N/A
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: methyl-coenzyme m reductase
Species: METHANOTHERMOBACTER WOLFEII [TaxId:145261]
Database cross-references and differences (RAF-indexed):
- PDB 5A8K
Domains in SCOPe 2.07: d5a8ka1, d5a8ka2
Chain 'B':
Compound: methyl-coenzyme m reductase
Species: METHANOTHERMOBACTER WOLFEII [TaxId:145261]
Database cross-references and differences (RAF-indexed):
- PDB 5A8K (Start-442)
Domains in SCOPe 2.07: d5a8kb1, d5a8kb2
Chain 'C':
Compound: methyl-coenzyme m reductase
Species: METHANOTHERMOBACTER WOLFEII [TaxId:145261]
Database cross-references and differences (RAF-indexed):
- PDB 5A8K (Start-248)
Domains in SCOPe 2.07: d5a8kc_
Chain 'D':
Compound: methyl-coenzyme m reductase
Species: METHANOTHERMOBACTER WOLFEII [TaxId:145261]
Database cross-references and differences (RAF-indexed):
- PDB 5A8K
Domains in SCOPe 2.07: d5a8kd1, d5a8kd2
Chain 'E':
Compound: methyl-coenzyme m reductase
Species: METHANOTHERMOBACTER WOLFEII [TaxId:145261]
Database cross-references and differences (RAF-indexed):
- PDB 5A8K (Start-442)
Domains in SCOPe 2.07: d5a8ke1, d5a8ke2
Chain 'F':
Compound: methyl-coenzyme m reductase
Species: METHANOTHERMOBACTER WOLFEII [TaxId:145261]
Database cross-references and differences (RAF-indexed):
- PDB 5A8K (Start-248)
Domains in SCOPe 2.07: d5a8kf_
Heterogens: COM, TP7, K, CA, F43, ETX, MG, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>5a8kA (A:)
madklfinalkkkfeespeekkttfytlggwkqserktefvnagkevaekrgipqynpdi
gtplgqrvlmpyqvsttdtyvegddlhfvnnaamqqlwddirrtvivglnhahaviekrl
gkevtpetithyletvnhampgaavvqehmvethpalvadsyvkvftgndeiadeidpaf
vidinkqfpedqaetlkaevgdgiwqvvriptivsrtcdgattsrwsamqigmsmisayk
qaageaatgdfayaakhaevihmgtylpvrrargenepggvpfgyladicqssrvnyddp
vrvsldvvatgamlydqiwlgsymsggvgftqyataaytdnilddftyfgkeyvedkygl
ceapntmdtvldiatevtfygleqyeeypalledqfggsqraavvaaaagcstafatgna
qtglsgwylsmylhkeqhsrlgfygydlqdqcgasnvfsirgdeglplelrgpnypnyam
nvghqgeyagisqaphaargdafvfnplvkiafaddnlvfdftnvrgefakgalrefepa
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