PDB entry 4npb

View 4npb on RCSB PDB site
Description: The crystal structure of thiol:disulfide interchange protein DsbC from Yersinia pestis CO92
Class: isomerase
Keywords: structural genomics, The Center for Structural Genomics of Infectious Diseases, CSGID, NIAID, National Institute of Allergy and Infectious Diseases, ISOMERASE
Deposited on 2013-11-21, released 2013-12-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-12-25, with a file datestamp of 2013-12-20.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.194
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein disulfide isomerase II
    Species: Yersinia pestis [TaxId:214092]
    Gene: dsbC, y3275, Yersinia pestis, YPO0891, YP_3587
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7CGT8 (3-End)
      • expression tag (2)
    Domains in SCOPe 2.07: d4npba1, d4npba2, d4npba3
  • Chain 'B':
    Compound: Protein disulfide isomerase II
    Species: Yersinia pestis [TaxId:214092]
    Gene: dsbC, y3275, Yersinia pestis, YPO0891, YP_3587
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7CGT8 (3-End)
      • expression tag (2)
    Domains in SCOPe 2.07: d4npbb1, d4npbb2, d4npbb3
  • Heterogens: SUC, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4npbA (A:)
snaddsaiqqtlkkldiqqadiqpspipgistvmtesgvlyisadgkhllqgplydvsgd
qpinvtnqallkklealssemivykapeekhvitvftditcgycrklheqmkdynalgit
vrylafprqglssqaekdmrsiwcmadrnkafddamknndispatcktdiskhyqlgvqf
giqgtpaivlqngtivpgyqgpkemlqmlnahqaslkagg

    Sequence, based on observed residues (ATOM records): (download) 
    >4npbA (A:)
addsaiqqtlkkldiqqadiqpspipgistvmtesgvlyisadgkhllqgplydvsgdqp
invtnqallkklealssemivykapeekhvitvftditcgycrklheqmkdynalgitvr
ylafprqglssqaekdmrsiwcmadrnkafddamknndispatcktdiskhyqlgvqfgi
qgtpaivlqngtivpgyqgpkemlqmlnahqaslk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4npbB (B:)
snaddsaiqqtlkkldiqqadiqpspipgistvmtesgvlyisadgkhllqgplydvsgd
qpinvtnqallkklealssemivykapeekhvitvftditcgycrklheqmkdynalgit
vrylafprqglssqaekdmrsiwcmadrnkafddamknndispatcktdiskhyqlgvqf
giqgtpaivlqngtivpgyqgpkemlqmlnahqaslkagg

    Sequence, based on observed residues (ATOM records): (download) 
    >4npbB (B:)
addsaiqqtlkkldiqqadiqpspipgistvmtesgvlyisadgkhllqgplydvsgdqp
invtnqallkklealssemivykapeekhvitvftditcgycrklheqmkdynalgitvr
ylafprqglssqaekdmrsiwcmadrnkafddamknndispatcktdiskhyqlgvqfgi
qgtpaivlqngtivpgyqgpkemlqmlnahqaslk