PDB entry 4akz

View 4akz on RCSB PDB site
Description: crystal structure of virb8 from brucella suis
Class: transport protein
Keywords: transport protein
Deposited on 2012-02-29, released 2012-09-05
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-09-05, with a file datestamp of 2012-08-31.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.1917
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: type IV secretion system protein virb8
    Species: Brucella suis [TaxId:29461]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4akza_
  • Chain 'B':
    Compound: type IV secretion system protein virb8
    Species: Brucella suis [TaxId:29461]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4akzb_
  • Chain 'C':
    Compound: type IV secretion system protein virb8
    Species: Brucella suis [TaxId:29461]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4akzc_
  • Chain 'D':
    Compound: type IV secretion system protein virb8
    Species: Brucella suis [TaxId:29461]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4akzd_
  • Chain 'E':
    Compound: type IV secretion system protein virb8
    Species: Brucella suis [TaxId:29461]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4akze_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4akzA (A:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4akzB (B:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

    Sequence, based on observed residues (ATOM records): (download) 
    >4akzB (B:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtdgetthwiatigyqyvnpslmsesarltn
plgfnvtsyrvdpe

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4akzC (C:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

    Sequence, based on observed residues (ATOM records): (download) 
    >4akzC (C:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtdgetthwiatigyqyvnpslmsesarltn
plgfnvtsyrvdpe

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4akzD (D:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

    Sequence, based on observed residues (ATOM records): (download) 
    >4akzD (D:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtgetthwiatigyqyvnpslmsesarltnp
lgfnvtsyrvdpe

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4akzE (E:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

    Sequence, based on observed residues (ATOM records): (download) 
    >4akzE (E:)
sydtvmdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtdgetthwiatigyqyvnpslmsesarltn
plgfnvtsyrvdpe