PDB entry 3m0e

View 3m0e on RCSB PDB site
Description: Crystal structure of the ATP-bound state of Walker B mutant of NtrC1 ATPase domain
Class: transcription
Keywords: AAA+ ATPase domain, GAFTGA loop, Arginine finger, sigma54 activator, bacterial enhancer binding protein, bacterial transcription, two-component signal transduction, ATP-binding, DNA-binding, Nucleotide-binding, Transcription, Transcription regulation, molecular motor
Deposited on 2010-03-02, released 2010-11-03
The last revision prior to the SCOPe 2.06 freeze date was dated 2010-12-01, with a file datestamp of 2010-11-26.
Experiment type: XRAY
Resolution: 2.63 Å
R-factor: 0.209
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0ea_
  • Chain 'B':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0eb_
  • Chain 'C':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0ec_
  • Chain 'D':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0ed_
  • Chain 'E':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0ee_
  • Chain 'F':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0ef_
  • Chain 'G':
    Compound: transcriptional regulator (NtrC family)
    Species: Aquifex aeolicus [TaxId:63363]
    Gene: aq_1117, ntrC1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67198
      • engineered (117)
    Domains in SCOPe 2.06: d3m0eg_
  • Heterogens: ATP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3m0eA (A:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eA (A:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3m0eB (B:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eB (B:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3m0eC (C:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eC (C:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3m0eD (D:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eD (D:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3m0eE (E:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eE (E:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3m0eF (F:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eF (F:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >3m0eG (G:)
    rkenellrrekdlkeeeyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlih
    klsdrskepfvalnvasiprdifeaelfgyekgaftgavsskegffeladggtlfldaig
    elsleaqakllrviesgkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlg
    vieieipplrerkediiplanhflkkfsrkyakevegftksaqelllsypwygnvrelkn
    vieravlfsegkfidrgelsclvnsk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3m0eG (G:)
    eyvfespkmkeilekikkiscaecpvlitgesgvgkevvarlihklsdrskepfvalnva
    siprdifeaelfgyekgaftgavsskegffeladggtlfldaigelsleaqakllrvies
    gkfyrlggrkeievnvrilaatnrnikelvkegkfredlyyrlgvieieipplrerkedi
    iplanhflkkfsrkyakevegftksaqelllsypwygnvrelknvieravlfsegkfidr
    gelsclv