SCOPe 2.08: Structural Classification of Proteins

PDB entry 2v69

View 2v69 on RCSB PDB site
Description: Crystal structure of Chlamydomonas reinhardtii Rubisco with a large- subunit mutation D473E
Class: oxidoreductase
Keywords: large subunit loop 6 mutation, co2/o2 specificity, carbon dioxide fixation, photosynthesis, transit peptide, photorespiration, metal-binding, hydroxylation, oxidoreductase, methylation, chloroplast, calvin cycle, monooxygenase, lyase, rubisco, plastid, magnesium, acetylation
Deposited on 2007-07-14, released 2007-07-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-17, with a file datestamp of 2018-01-12.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69a1, d2v69a2
Chain 'B':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69b1, d2v69b2
Chain 'C':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69c1, d2v69c2
Chain 'D':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
  - engineered mutation (472)
Domains in SCOPe 2.08: d2v69d1, d2v69d2
Chain 'E':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69e1, d2v69e2
Chain 'F':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69f1, d2v69f2
Chain 'G':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69g1, d2v69g2
Chain 'H':
Compound: ribulose bisphosphate carboxylase large chain
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00877
  - conflict (45)
Domains in SCOPe 2.08: d2v69h1, d2v69h2
Chain 'I':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69i_
Chain 'J':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69j_
Chain 'K':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69k_
Chain 'L':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69l_
Chain 'M':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69m_
Chain 'N':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69n_
Chain 'O':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69o_
Chain 'P':
Compound: ribulose bisphosphate carboxylase small chain 1
Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
Database cross-references and differences (RAF-indexed):
- Uniprot P00873 (0-139)
Domains in SCOPe 2.08: d2v69p_
Heterogens: MG, CAP, EDO, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2v69A (A:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtiekl