PDB entry 2jaz

View 2jaz on RCSB PDB site
Description: crystal structure of the mutant n560d of the nuclease domain of cole7 in complex with im7
Class: hydrolase/inhibitor
Keywords: hydrolase/inhibitor, hydrolase/inhibitor complex, zinc, toxin, plasmid, nuclease, hydrolase, antibiotic, h-n-h motif, bacteriocin, endonuclease, metal-binding, antimicrobial, DNA hydrolysis, bacteriocin immunity, his metal finger motif
Deposited on 2006-12-01, released 2007-04-03
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: 0.205
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: colicin e7 immunity protein
    Species: ESCHERICHIA COLI [TaxId:316407]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2jaza_
  • Chain 'B':
    Compound: colicin e7
    Species: ESCHERICHIA COLI [TaxId:316407]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q47112 (Start-130)
      • engineered mutation (114)
    Domains in SCOPe 2.04: d2jazb1
  • Chain 'C':
    Compound: colicin e7 immunity protein
    Species: ESCHERICHIA COLI [TaxId:316407]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2jazc_
  • Chain 'D':
    Compound: colicin e7
    Species: ESCHERICHIA COLI [TaxId:316407]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q47112 (Start-130)
      • engineered mutation (114)
    Domains in SCOPe 2.04: d2jazd_
  • Heterogens: ZN, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2jazA (A:)
melknsisdyteaefvqllkeiekenvaatddvldvllehfvkitehpdgtdliyypsdn
rddspegivkeikewraangkpgfkqg

    Sequence, based on observed residues (ATOM records): (download) 
    >2jazA (A:)
elknsisdyteaefvqllkeiekenvaatddvldvllehfvkitehpdgtdliyypsdnr
ddspegivkeikewraangkpgfkqg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2jazB (B:)
krnkpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfddfrkkfweevsk
dpelskqfsrnnndrmkvgkapktrtqdvsgkrtsfelhhekpisqnggvydmddisvvt
pkrhidihrgk

    Sequence, based on observed residues (ATOM records): (download) 
    >2jazB (B:)
pgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfddfrkkfweevskdpel
skqfsrnnndrmkvgkapktrtqdvsgkrtsfelhhekvydmddisvvtpkrhidihrgk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2jazC (C:)
melknsisdyteaefvqllkeiekenvaatddvldvllehfvkitehpdgtdliyypsdn
rddspegivkeikewraangkpgfkqg

    Sequence, based on observed residues (ATOM records): (download) 
    >2jazC (C:)
elknsisdyteaefvqllkeiekenvaatddvldvllehfvkitehpdgtdliyypsdnr
ddspegivkeikewraangkpgfkqg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2jazD (D:)
krnkpgkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfddfrkkfweevsk
dpelskqfsrnnndrmkvgkapktrtqdvsgkrtsfelhhekpisqnggvydmddisvvt
pkrhidihrgk

    Sequence, based on observed residues (ATOM records): (download) 
    >2jazD (D:)
gkatgkgkpvnnkwlnnagkdlgspvpdrianklrdkefksfddfrkkfweevskdpels
kqfsrnnndrmkvgkapktrtqdvsgkrtsfelhhekvydmddisvvtpkrhidihrgk