SCOPe 2.08: Structural Classification of Proteins

PDB entry 1yde

View 1yde on RCSB PDB site
Description: Crystal Structure of Human Retinal Short-Chain Dehydrogenase/Reductase 3
Class: oxidoreductase
Keywords: OXIDOREDUCTASE, Structural Genomics, Structural Genomics Consortium, SGC
Deposited on 2004-12-23, released 2005-01-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-03-14, with a file datestamp of 2012-03-09.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.182
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydea1
Chain 'B':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydeb_
Chain 'C':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydec_
Chain 'D':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1yded_
Chain 'E':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydee_
Chain 'F':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydef_
Chain 'G':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydeg_
Chain 'H':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydeh_
Chain 'I':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydei_
Chain 'J':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydej_
Chain 'K':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydek_
Chain 'L':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydel_
Chain 'M':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydem_
Chain 'N':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1yden_
Chain 'O':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydeo_
Chain 'P':
Compound: Retinal dehydrogenase/reductase 3
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9BPX1
Domains in SCOPe 2.08: d1ydep_
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1ydeA (A:)
matgtryagkvvvvtgggrgigagivrafvnsgarvvicdkdesggraleqelpgavfil
cdvtqeddvktlvsetirrfgrldcvvnnaghhpppqrpeetsaqgfrqllelnllgtyt
ltklalpylrksqgnvinisslvgaigqaqavpyvatkgavtamtkalaldespygvrvn
cispgniwtplweelaalmpdprasiregmlaqplgrmgqpaevgaaavflaseanfctg
iellvtggaelgygckasrstpvdapdips