SCOPe 2.06: Domain d1jqjc2: 1jqj C:1-211

Lineage for d1jqjc2 (1jqj C:1-211)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.20: Extended AAA-ATPase domain [81269] (29 proteins)
   fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain

6. Protein delta subunit of DNA polymerase III, N-domain [64033] (1 species)

7. Species Escherichia coli [TaxId:562] [64034] (5 PDB entries)
   Uniprot P28630

8. Domain d1jqjc2: 1jqj C:1-211 [67098]
   Other proteins in same PDB: d1jqja1, d1jqja2, d1jqja3, d1jqjb1, d1jqjb2, d1jqjb3, d1jqjc1, d1jqjd1
   protein/DNA complex

Details for d1jqjc2

PDB Entry: 1jqj, 2.9 Å

PDB Description: mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of e. coli dna polymerase iii: structure of the beta-delta complex

PDB Compounds: (C:) DNA Polymerase III, DELTA SUBUNIT

SCOPe Domain Sequences for d1jqjc2:

Sequence; same for both SEQRES and ATOM records:

>d1jqjc2 c.37.1.20 (C:1-211) delta subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
mirlypeqlraqlneglraaylllgndplllqesqdavrqvaaaqgfeehhtfsidpntd
wnaifslcqamslfasrqtlllllpengpnaaineqlltltgllhddlllivrgnklska
qenaawftalanrsvqvtcqtpeqaqlprwvaarakqlnlelddaanqvlcycyegnlla
laqalerlsllwpdgkltlprveqavndaah

Timeline for d1jqjc2:

• d1jqjc2 first appeared in SCOP 1.59
  
• d1jqjc2 appears in SCOPe 2.05
  
• d1jqjc2 appears in SCOPe 2.07
  
• d1jqjc2 appears in the current release, SCOPe 2.08