SCOPe 2.06: Domain d1jpnb2: 1jpn B:89-295

Lineage for d1jpnb2 (1jpn B:89-295)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.10: Nitrogenase iron protein-like [52652] (16 proteins)
   core: parallel beta-sheet of 7 strands; order 3241567

6. Protein GTPase domain of the signal sequence recognition protein Ffh [52664] (3 species)

7. Species Thermus aquaticus [TaxId:271] [52665] (17 PDB entries)

8. Domain d1jpnb2: 1jpn B:89-295 [67042]
   Other proteins in same PDB: d1jpna1, d1jpnb1
   complexed with acy, ca, gnp

Details for d1jpnb2

PDB Entry: 1jpn, 1.9 Å

PDB Description: GMPPNP Complex of SRP GTPase NG Domain

PDB Compounds: (B:) signal recognition particle protein

SCOPe Domain Sequences for d1jpnb2:

Sequence; same for both SEQRES and ATOM records:

>d1jpnb2 c.37.1.10 (B:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
earlpvlkdrnlwflvglqgsgktttaaklalyykgkgrrpllvaadtqrpaareqlrll
gekvgvpvlevmdgespesirrrveekarleardlilvdtagrlqideplmgelarlkev
lgpdevllvldamtgqealsvarafdekvgvtglvltkldgdarggaalsarhvtgkpiy
fagvsekpeglepfyperlagrilgmg

Timeline for d1jpnb2:

• d1jpnb2 first appeared in SCOP 1.59
  
• d1jpnb2 appears in SCOPe 2.05
  
• d1jpnb2 appears in SCOPe 2.07
  
• d1jpnb2 appears in the current release, SCOPe 2.08