SCOPe 2.01: Species: Simian virus 40, Sv40 [TaxId: 10633]

Lineage for Species: Simian virus 40, Sv40 [TaxId: 10633]

Root: SCOPe 2.01
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325
Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)
Family d.89.1.1: The origin DNA-binding domain of SV40 T-antigen [55465] (2 proteins)
Protein The origin DNA-binding domain of SV40 T-antigen [55466] (1 species)
Species Simian virus 40, Sv40 [TaxId:10633] [55467] (11 PDB entries)

PDB entries in Species: Simian virus 40, Sv40 [TaxId: 10633]:

Domain(s) for 1tbd:
- Domain d1tbda_: 1tbd A: [40240]
Domain(s) for 1z1d:
- Domain d1z1db1: 1z1d B:1-131 [124352]
  Other proteins in same PDB: d1z1da1
  automatically matched to d1tbd__
Domain(s) for 2fuf:
- Domain d2fufa_: 2fuf A: [134120]
  automated match to d1tbd__
  complexed with flc
Domain(s) for 2if9:
1. Domain d2if9a_: 2if9 A: [137327]
  automated match to d1tbd__
2. Domain d2if9b_: 2if9 B: [137328]
  automated match to d1tbd__
Domain(s) for 2ipr:
1. Domain d2ipra_: 2ipr A: [137583]
  automated match to d1tbd__
2. Domain d2iprb_: 2ipr B: [137584]
  automated match to d1tbd__
Domain(s) for 2itj:
1. Domain d2itja_: 2itj A: [137640]
  automated match to d1tbd__
2. Domain d2itjb_: 2itj B: [137641]
  automated match to d1tbd__
Domain(s) for 2itl:
1. Domain d2itla_: 2itl A: [137644]
  automated match to d1tbd__
  protein/DNA complex
2. Domain d2itlb_: 2itl B: [137645]
  automated match to d1tbd__
  protein/DNA complex
Domain(s) for 2nl8:
- Domain d2nl8a_: 2nl8 A: [166265]
  automated match to d1tbda_
  protein/DNA complex
Domain(s) for 2ntc:
1. Domain d2ntca_: 2ntc A: [138577]
  automated match to d1tbd__
  protein/DNA complex
2. Domain d2ntcb_: 2ntc B: [138578]
  automated match to d1tbd__
  protein/DNA complex
Domain(s) for 2tbd:
- Domain d2tbda_: 2tbd A: [40241]
Domain(s) for 3qk2:
- Domain d3qk2a_: 3qk2 A: [184457]
  automated match to d1tbda_
  complexed with scn

More info for Species Simian virus 40, Sv40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen

Timeline for Species Simian virus 40, Sv40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen:

Species Simian virus 40, Sv40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen first appeared (with stable ids) in SCOP 1.55, called Species Simian virus 40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen
Species Simian virus 40, Sv40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen appears in SCOP 1.75
Species Simian virus 40, Sv40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen appears in SCOPe 2.02
Species Simian virus 40, Sv40 [TaxId:10633] from d.89.1.1 The origin DNA-binding domain of SV40 T-antigen appears in the current release, SCOPe 2.08