Lineage for Superfamily d.14.1: Ribosomal protein S5 domain 2-like

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1636635Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
    core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
  4. 1636636Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families) (S)

Families:

  1. 1636637d.14.1.1: Translational machinery components [54212] (4 proteins)
  2. 1636813d.14.1.2: RNase P protein [54220] (1 protein)
    automatically mapped to Pfam PF00825
  3. 1636824d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 proteins)
  4. 1636876d.14.1.4: Ribonuclease PH domain 1-like [54229] (11 proteins)
  5. 1637067d.14.1.5: GHMP Kinase, N-terminal domain [54232] (7 proteins)
  6. 1637136d.14.1.6: Early switch protein XOL-1, N-terminal domain [89824] (1 protein)
    diverged from the GHMP Kinase family; lost the ATP-binding site
    automatically mapped to Pfam PF09108
  7. 1637141d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (2 proteins)
    duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site
  8. 1637199d.14.1.8: Hsp90 middle domain [102755] (2 proteins)
    related to the DNA gyrase/MutL family; contains extra C-terminal alpha/beta subdomain
    automatically mapped to Pfam PF00183
  9. 1637214d.14.1.9: Imidazole glycerol phosphate dehydratase [102766] (2 proteins)
    duplication; there are two structural repeats of this fold
  10. 1637272d.14.1.10: ATP-dependent protease Lon (La), catalytic domain [102769] (1 protein)
    contains extra C-terminal alpha/beta subdomain
    automatically mapped to Pfam PF05362
  11. 1637314d.14.1.11: YigZ N-terminal domain-like [102772] (2 proteins)
    modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand is inserted between strands 3 and 4
    automatically mapped to Pfam PF01205
  12. 1637321d.14.1.12: Formaldehyde-activating enzyme, FAE [117795] (1 protein)
    modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand extends beta-sheet antiparallel to strand 3
    automatically mapped to Pfam PF08714
  13. 1637334d.14.1.0: automated matches [191504] (1 protein)
    not a true family

More info for Superfamily d.14.1: Ribosomal protein S5 domain 2-like

Timeline for Superfamily d.14.1: Ribosomal protein S5 domain 2-like: