Class d: Alpha and beta proteins (a+b) [53931] (381 folds) |
Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily) core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover |
Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families) |
d.14.1.1: Translational machinery components [54212] (4 proteins) |
d.14.1.2: RNase P protein [54220] (1 protein) automatically mapped to Pfam PF00825 |
d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 proteins) |
d.14.1.4: Ribonuclease PH domain 1-like [54229] (11 proteins) |
d.14.1.5: GHMP Kinase, N-terminal domain [54232] (7 proteins) |
d.14.1.6: Early switch protein XOL-1, N-terminal domain [89824] (1 protein) diverged from the GHMP Kinase family; lost the ATP-binding site automatically mapped to Pfam PF09108 |
d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (2 proteins) duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site |
d.14.1.8: Hsp90 middle domain [102755] (2 proteins) related to the DNA gyrase/MutL family; contains extra C-terminal alpha/beta subdomain automatically mapped to Pfam PF00183 |
d.14.1.9: Imidazole glycerol phosphate dehydratase [102766] (2 proteins) duplication; there are two structural repeats of this fold |
d.14.1.10: ATP-dependent protease Lon (La), catalytic domain [102769] (1 protein) contains extra C-terminal alpha/beta subdomain automatically mapped to Pfam PF05362 |
d.14.1.11: YigZ N-terminal domain-like [102772] (2 proteins) modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand is inserted between strands 3 and 4 automatically mapped to Pfam PF01205 |
d.14.1.12: Formaldehyde-activating enzyme, FAE [117795] (1 protein) modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand extends beta-sheet antiparallel to strand 3 automatically mapped to Pfam PF08714 |
d.14.1.0: automated matches [191504] (1 protein) not a true family |
Timeline for Superfamily d.14.1: Ribosomal protein S5 domain 2-like: