SCOPe 2.05: Protein: Laccase

Lineage for Protein: Laccase

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)
Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands
Superfamily b.6.1: Cupredoxins [49503] (8 families)
contains copper-binding site
Family b.6.1.3: Multidomain cupredoxins [49550] (8 proteins)
Protein Laccase [49557] (5 species)
consists of three domains of this fold

Species:

Fungus (Melanocarpus albomyces) [TaxId:204285] [74873] (9 PDB entries)
1. Domains for 1gw0:
  1. Domain d1gw0a1: 1gw0 A:1-162 [70623]
    complexed with cl, cu, nag, oxy, so4
  2. Domain d1gw0a2: 1gw0 A:163-343 [70624]
    complexed with cl, cu, nag, oxy, so4
  3. Domain d1gw0a3: 1gw0 A:344-559 [70625]
    complexed with cl, cu, nag, oxy, so4
  4. Domain d1gw0b1: 1gw0 B:1-162 [70626]
    complexed with cl, cu, nag, oxy, so4
  5. Domain d1gw0b2: 1gw0 B:163-343 [70627]
    complexed with cl, cu, nag, oxy, so4
  6. Domain d1gw0b3: 1gw0 B:344-559 [70628]
    complexed with cl, cu, nag, oxy, so4
2. Domains for 2ih8:
  1. Domain d2ih8a1: 2ih8 A:1-162 [137407]
    automated match to d1gw0a1
    complexed with cl, cu, nag, ndg, oxy, so4
  2. Domain d2ih8a2: 2ih8 A:163-343 [137408]
    automated match to d1gw0a2
    complexed with cl, cu, nag, ndg, oxy, so4
  3. Domain d2ih8a3: 2ih8 A:344-559 [137409]
    automated match to d1gw0a3
    complexed with cl, cu, nag, ndg, oxy, so4
  4. Domain d2ih8b1: 2ih8 B:1-162 [137410]
    automated match to d1gw0a1
    complexed with cl, cu, nag, ndg, oxy, so4
  5. Domain d2ih8b2: 2ih8 B:163-343 [137411]
    automated match to d1gw0a2
    complexed with cl, cu, nag, ndg, oxy, so4
  6. Domain d2ih8b3: 2ih8 B:344-559 [137412]
    automated match to d1gw0a3
    complexed with cl, cu, nag, ndg, oxy, so4
3. Domains for 2ih9:
  1. Domain d2ih9a1: 2ih9 A:1-162 [137413]
    automated match to d1gw0a1
    complexed with 5ax, cl, cu, nag, so4
  2. Domain d2ih9a2: 2ih9 A:163-343 [137414]
    automated match to d1gw0a2
    complexed with 5ax, cl, cu, nag, so4
  3. Domain d2ih9a3: 2ih9 A:344-559 [137415]
    automated match to d1gw0a3
    complexed with 5ax, cl, cu, nag, so4
  4. Domain d2ih9b1: 2ih9 B:1-162 [137416]
    automated match to d1gw0a1
    complexed with 5ax, cl, cu, nag, so4
  5. Domain d2ih9b2: 2ih9 B:163-343 [137417]
    automated match to d1gw0a2
    complexed with 5ax, cl, cu, nag, so4
  6. Domain d2ih9b3: 2ih9 B:344-559 [137418]
    automated match to d1gw0a3
    complexed with 5ax, cl, cu, nag, so4
4. Domains for 2q9o:
  1. Domain d2q9oa1: 2q9o A:1-162 [150149]
    automated match to d1gw0a1
    complexed with cl, cu, gol, man, nag, oxy, so4
  2. Domain d2q9oa2: 2q9o A:163-343 [150150]
    automated match to d1gw0a2
    complexed with cl, cu, gol, man, nag, oxy, so4
  3. Domain d2q9oa3: 2q9o A:344-559 [150151]
    automated match to d1gw0a3
    complexed with cl, cu, gol, man, nag, oxy, so4
  4. Domain d2q9ob1: 2q9o B:1-162 [150152]
    automated match to d1gw0a1
    complexed with cl, cu, gol, man, nag, oxy, so4
  5. Domain d2q9ob2: 2q9o B:163-343 [150153]
    automated match to d1gw0a2
    complexed with cl, cu, gol, man, nag, oxy, so4
  6. Domain d2q9ob3: 2q9o B:344-559 [150154]
    automated match to d1gw0a3
    complexed with cl, cu, gol, man, nag, oxy, so4
5. Domains for 3dkh:
  1. Domain d3dkha1: 3dkh A:2-162 [264735]
    automated match to d2q9oa1
    complexed with cl, cu, gol, nag, oxy, so4; mutant
  2. Domain d3dkha2: 3dkh A:163-343 [264736]
    automated match to d2q9oa2
    complexed with cl, cu, gol, nag, oxy, so4; mutant
  3. Domain d3dkha3: 3dkh A:344-559 [264737]
    automated match to d2q9oa3
    complexed with cl, cu, gol, nag, oxy, so4; mutant
  4. Domain d3dkhb1: 3dkh B:2-162 [264738]
    automated match to d2q9oa1
    complexed with cl, cu, gol, nag, oxy, so4; mutant
  5. Domain d3dkhb2: 3dkh B:163-343 [264739]
    automated match to d2q9oa2
    complexed with cl, cu, gol, nag, oxy, so4; mutant
  6. Domain d3dkhb3: 3dkh B:344-559 [264740]
    automated match to d2q9oa3
    complexed with cl, cu, gol, nag, oxy, so4; mutant
6. Domains for 3fu7:
  1. Domain d3fu7a1: 3fu7 A:1-162 [210131]
    automated match to d1gw0a1
    complexed with 3dm, cl, cu, d2m, kia, nag, oxy, so4
  2. Domain d3fu7a2: 3fu7 A:163-343 [210132]
    automated match to d1gw0a2
    complexed with 3dm, cl, cu, d2m, kia, nag, oxy, so4
  3. Domain d3fu7a3: 3fu7 A:344-559 [210133]
    automated match to d1gw0a3
    complexed with 3dm, cl, cu, d2m, kia, nag, oxy, so4
  4. Domain d3fu7b1: 3fu7 B:1-162 [210134]
    automated match to d1gw0a1
    complexed with 3dm, cl, cu, d2m, kia, nag, oxy, so4
  5. Domain d3fu7b2: 3fu7 B:163-343 [210135]
    automated match to d1gw0a2
    complexed with 3dm, cl, cu, d2m, kia, nag, oxy, so4
  6. Domain d3fu7b3: 3fu7 B:344-559 [210136]
    automated match to d1gw0a3
    complexed with 3dm, cl, cu, d2m, kia, nag, oxy, so4
7. Domains for 3fu8:
  1. Domain d3fu8a1: 3fu8 A:1-162 [210137]
    automated match to d1gw0a1
    complexed with 3dm, cl, cu, gol, nag, so4
  2. Domain d3fu8a2: 3fu8 A:163-343 [210138]
    automated match to d1gw0a2
    complexed with 3dm, cl, cu, gol, nag, so4
  3. Domain d3fu8a3: 3fu8 A:344-559 [210139]
    automated match to d1gw0a3
    complexed with 3dm, cl, cu, gol, nag, so4
  4. Domain d3fu8b1: 3fu8 B:1-162 [210140]
    automated match to d1gw0a1
    complexed with 3dm, cl, cu, gol, nag, so4
  5. Domain d3fu8b2: 3fu8 B:163-343 [210141]
    automated match to d1gw0a2
    complexed with 3dm, cl, cu, gol, nag, so4
  6. Domain d3fu8b3: 3fu8 B:344-559 [210142]
    automated match to d1gw0a3
    complexed with 3dm, cl, cu, gol, nag, so4
8. Domains for 3fu9:
  1. Domain d3fu9a1: 3fu9 A:1-162 [210143]
    automated match to d1gw0a1
    complexed with cl, cu, kib, nag, so4
  2. Domain d3fu9a2: 3fu9 A:163-343 [210144]
    automated match to d1gw0a2
    complexed with cl, cu, kib, nag, so4
  3. Domain d3fu9a3: 3fu9 A:344-559 [210145]
    automated match to d1gw0a3
    complexed with cl, cu, kib, nag, so4
  4. Domain d3fu9b1: 3fu9 B:1-162 [210146]
    automated match to d1gw0a1
    complexed with cl, cu, kib, nag, so4
  5. Domain d3fu9b2: 3fu9 B:163-343 [210147]
    automated match to d1gw0a2
    complexed with cl, cu, kib, nag, so4
  6. Domain d3fu9b3: 3fu9 B:344-559 [210148]
    automated match to d1gw0a3
    complexed with cl, cu, kib, nag, so4
9. Domains for 3qpk:
  1. Domain d3qpka1: 3qpk A:1-162 [215343]
    automated match to d1gw0a1
    complexed with cl, cu, nag, so4, xe
  2. Domain d3qpka2: 3qpk A:163-343 [215344]
    automated match to d1gw0a2
    complexed with cl, cu, nag, so4, xe
  3. Domain d3qpka3: 3qpk A:344-559 [215345]
    automated match to d1gw0a3
    complexed with cl, cu, nag, so4, xe
  4. Domain d3qpkb1: 3qpk B:1-162 [215346]
    automated match to d1gw0a1
    complexed with cl, cu, nag, so4, xe
  5. Domain d3qpkb2: 3qpk B:163-343 [215347]
    automated match to d1gw0a2
    complexed with cl, cu, nag, so4, xe
  6. Domain d3qpkb3: 3qpk B:344-559 [215348]
    automated match to d1gw0a3
    complexed with cl, cu, nag, so4, xe
Inky cap fungus (Coprinus cinereus) [TaxId:5346] [49558] (2 PDB entries)
1. Domains for 1a65:
  1. Domain d1a65a1: 1a65 A:1-131 [23148]
    complexed with cu, nag, o, pye
  2. Domain d1a65a2: 1a65 A:132-303 [23149]
    complexed with cu, nag, o, pye
  3. Domain d1a65a3: 1a65 A:304-504 [23150]
    complexed with cu, nag, o, pye
2. Domains for 1hfu:
  1. Domain d1hfua1: 1hfu A:1-131 [65827]
    complexed with cu
  2. Domain d1hfua2: 1hfu A:132-303 [65828]
    complexed with cu
  3. Domain d1hfua3: 1hfu A:304-503 [65829]
    complexed with cu
Rigidoporus lignosus [TaxId:219653] [110102] (1 PDB entry)
Uniprot Q6H9H7 22-515
- Domains for 1v10:
  1. Domain d1v10a1: 1v10 A:1-136 [108224]
    complexed with cu
  2. Domain d1v10a2: 1v10 A:137-304 [108225]
    complexed with cu
  3. Domain d1v10a3: 1v10 A:305-494 [108226]
    complexed with cu
Trametes versicolor, laccase 1 [TaxId:5325] [74871] (1 PDB entry)
- Domains for 1kya:
  1. Domain d1kyaa1: 1kya A:1-130 [73203]
    complexed with cu, nag, pye, xyd
  2. Domain d1kyaa2: 1kya A:131-300 [73204]
    complexed with cu, nag, pye, xyd
  3. Domain d1kyaa3: 1kya A:301-499 [73205]
    complexed with cu, nag, pye, xyd
  4. Domain d1kyab1: 1kya B:1-130 [73206]
    complexed with cu, nag, pye, xyd
  5. Domain d1kyab2: 1kya B:131-300 [73207]
    complexed with cu, nag, pye, xyd
  6. Domain d1kyab3: 1kya B:301-499 [73208]
    complexed with cu, nag, pye, xyd
  7. Domain d1kyac1: 1kya C:1-130 [73209]
    complexed with cu, nag, pye, xyd
  8. Domain d1kyac2: 1kya C:131-300 [73210]
    complexed with cu, nag, pye, xyd
  9. Domain d1kyac3: 1kya C:301-499 [73211]
    complexed with cu, nag, pye, xyd
  10. Domain d1kyad1: 1kya D:1-130 [73212]
    complexed with cu, nag, pye, xyd
  11. Domain d1kyad2: 1kya D:131-300 [73213]
    complexed with cu, nag, pye, xyd
  12. Domain d1kyad3: 1kya D:301-499 [73214]
    complexed with cu, nag, pye, xyd
Trametes versicolor, laccase 2 [TaxId:5325] [74872] (1 PDB entry)
- Domains for 1gyc:
  1. Domain d1gyca1: 1gyc A:1-130 [70748]
    complexed with cu, ipa, nag
  2. Domain d1gyca2: 1gyc A:131-300 [70749]
    complexed with cu, ipa, nag
  3. Domain d1gyca3: 1gyc A:301-499 [70750]
    complexed with cu, ipa, nag

More info for Protein Laccase from b.6.1.3: Multidomain cupredoxins

Timeline for Protein Laccase from b.6.1.3: Multidomain cupredoxins:

Protein Laccase from b.6.1.3: Multidomain cupredoxins first appeared (with stable ids) in SCOP 1.55
Protein Laccase from b.6.1.3: Multidomain cupredoxins appears in SCOPe 2.04
Protein Laccase from b.6.1.3: Multidomain cupredoxins appears in SCOPe 2.06
Protein Laccase from b.6.1.3: Multidomain cupredoxins last appears in SCOPe 2.07