SCOPe 2.05: Family b.1.8.1: Cu,Zn superoxide dismutase-like

Lineage for Family b.1.8.1: Cu,Zn superoxide dismutase-like

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.8: Cu,Zn superoxide dismutase-like [49329] (2 families)
   has additional strand at N-terminus

5. Family b.1.8.1: Cu,Zn superoxide dismutase-like [49330] (3 proteins)

Proteins:

1. Copper chaperone for superoxide dismutase, C-terminal domain [49341] (2 species)

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [49342] (3 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [49343] (1 PDB entry)

2. Cu,Zn superoxide dismutase, SOD [49331] (16 species)

   1. Species Actinobacillus pleuropneumoniae [TaxId:715] [49340] (1 PDB entry)

   2. Species African clawed frog (Xenopus laevis) [TaxId:8355] [49334] (1 PDB entry)

   3. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [49336] (12 PDB entries)

   4. Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [110066] (2 PDB entries)
      Uniprot Q01137

   5. Species Brucella abortus [TaxId:235] [187418] (1 PDB entry)

   6. Species Cow (Bos taurus) [TaxId:9913] [49332] (23 PDB entries)

   7. Species Escherichia coli [TaxId:562] [49338] (1 PDB entry)
      Monomeric enzyme

   8. Species Haemophilus ducreyi [TaxId:730] [188174] (2 PDB entries)

   9. Species Human (Homo sapiens) [TaxId:9606] [49333] (71 PDB entries)

   10. Species Mouse (Mus musculus) [TaxId:10090] [189448] (2 PDB entries)

   11. Species Mycobacterium tuberculosis [TaxId:1773] [110065] (1 PDB entry)
       Uniprot P96278

   12. Species Neisseria meningitidis [TaxId:487] [187416] (6 PDB entries)

   13. Species Photobacterium leiognathi [TaxId:553611] [49337] (9 PDB entries)

   14. Species Salmonella typhimurium [TaxId:90371] [49339] (1 PDB entry)

   15. Species Silkworm (Bombyx mori) [TaxId:7091] [189285] (2 PDB entries)

   16. Species Spinach (Spinacia oleracea) [TaxId:3562] [49335] (1 PDB entry)

3. automated matches [190916] (9 species)
   not a true protein

   1. Species Alvinella pompejana [TaxId:6376] [188764] (2 PDB entries)

   2. Species Cryptococcus liquefaciens [TaxId:104408] [188577] (1 PDB entry)

   3. Species Human (Homo sapiens) [TaxId:9606] [189462] (4 PDB entries)

   4. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [189491] (2 PDB entries)

   5. Species Potentilla atrosanguinea [TaxId:487759] [188394] (1 PDB entry)

   6. Species Salmonella enterica [TaxId:119912] [255320] (1 PDB entry)

   7. Species Solanum lycopersicum [TaxId:4081] [196089] (6 PDB entries)

   8. Species Taenia solium [TaxId:6204] [189715] (1 PDB entry)

   9. Species Yersinia pseudotuberculosis [TaxId:633] [189541] (2 PDB entries)

More info for Family b.1.8.1: Cu,Zn superoxide dismutase-like

Timeline for Family b.1.8.1: Cu,Zn superoxide dismutase-like:

• Family b.1.8.1: Cu,Zn superoxide dismutase-like first appeared (with stable ids) in SCOP 1.55
  
• Family b.1.8.1: Cu,Zn superoxide dismutase-like appears in SCOPe 2.04
  
• Family b.1.8.1: Cu,Zn superoxide dismutase-like appears in SCOPe 2.06
  
• Family b.1.8.1: Cu,Zn superoxide dismutase-like appears in the current release, SCOPe 2.08