SCOPe 2.07: Protein: Transcription factor IIB (TFIIB), core domain

Lineage for Protein: Transcription factor IIB (TFIIB), core domain

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.74: Cyclin-like [47953] (1 superfamily)
core: 5 helices; one helix is surrounded by the others
Superfamily a.74.1: Cyclin-like [47954] (4 families)
duplication: consists of two domains of this fold
Family a.74.1.2: Transcription factor IIB (TFIIB), core domain [47965] (1 protein)
Protein Transcription factor IIB (TFIIB), core domain [47966] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [47967] (4 PDB entries)
1. Domains for 1c9b:
  1. Domain d1c9ba1: 1c9b A:110-207 [18372]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  2. Domain d1c9ba2: 1c9b A:208-316 [18373]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  3. Domain d1c9be1: 1c9b E:110-207 [18374]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  4. Domain d1c9be2: 1c9b E:208-316 [18375]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  5. Domain d1c9bi1: 1c9b I:110-207 [18376]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  6. Domain d1c9bi2: 1c9b I:208-316 [18377]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  7. Domain d1c9bm1: 1c9b M:110-207 [18378]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  8. Domain d1c9bm2: 1c9b M:208-316 [18379]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  9. Domain d1c9bq1: 1c9b Q:110-207 [18380]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
  10. Domain d1c9bq2: 1c9b Q:208-316 [18381]
    Other proteins in same PDB: d1c9bb1, d1c9bb2, d1c9bf1, d1c9bf2, d1c9bj1, d1c9bj2, d1c9bn1, d1c9bn2, d1c9br1, d1c9br2
    protein/DNA complex
2. Domains for 1tfb:
  1. Domain d1tfba1: 1tfb A:111-207 [18382]
  2. Domain d1tfba2: 1tfb A:208-316 [18383]
3. Domains for 1vol:
  1. Domain d1vola1: 1vol A:113-207 [18370]
    Other proteins in same PDB: d1volb1, d1volb2
    protein/DNA complex
  2. Domain d1vola2: 1vol A:208-316 [18371]
    Other proteins in same PDB: d1volb1, d1volb2
    protein/DNA complex
4. Domains for 2phg:
  1. Domain d2phga1: 2phg A:111-207 [139694]
    automated match to d1c9ba1
  2. Domain d2phga2: 2phg A:208-316 [139695]
    automated match to d1vola2
Pyrococcus woesei [TaxId:2262] [47968] (2 PDB entries)
1. Domains for 1ais:
  1. Domain d1aisb1: 1ais B:1108-1205 [18384]
    Other proteins in same PDB: d1aisa1, d1aisa2
    protein/DNA complex
  2. Domain d1aisb2: 1ais B:1206-1300 [18385]
    Other proteins in same PDB: d1aisa1, d1aisa2
    protein/DNA complex
2. Domains for 1d3u:
  1. Domain d1d3ub1: 1d3u B:1100-1205 [18386]
    Other proteins in same PDB: d1d3ua1, d1d3ua2
    protein/DNA complex
  2. Domain d1d3ub2: 1d3u B:1206-1300 [18387]
    Other proteins in same PDB: d1d3ua1, d1d3ua2
    protein/DNA complex

More info for Protein Transcription factor IIB (TFIIB), core domain from a.74.1.2: Transcription factor IIB (TFIIB), core domain

Timeline for Protein Transcription factor IIB (TFIIB), core domain from a.74.1.2: Transcription factor IIB (TFIIB), core domain:

Protein Transcription factor IIB (TFIIB), core domain from a.74.1.2: Transcription factor IIB (TFIIB), core domain first appeared (with stable ids) in SCOP 1.55
Protein Transcription factor IIB (TFIIB), core domain from a.74.1.2: Transcription factor IIB (TFIIB), core domain appears in SCOPe 2.06
Protein Transcription factor IIB (TFIIB), core domain from a.74.1.2: Transcription factor IIB (TFIIB), core domain appears in the current release, SCOPe 2.08