SCOPe 2.08: Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain

Lineage for Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain [46919] (3 families)

Families:

1. a.4.10.1: HIV/SIV integrase, N-terminal Zn binding domain [46920] (2 proteins)
   Zn-binding site is near the C-terminus
   Pfam PF02022

2. a.4.10.2: Spumaviral integrase, N-terminal Zn binding domain [418801] (1 protein)
   includes N-terminal extention domain described in PubMed 20118915
   Pfam PF17921

3. a.4.10.0: automated matches [380158] (1 protein)
   not a true family

More info for Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain

Timeline for Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain:

• Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain first appeared (with stable ids) in SCOP 1.55, called Superfamily a.4.10: N-terminal Zn binding domain of HIV integrase
  
• Superfamily a.4.10: Retroviral integrase, N-terminal Zn binding domain was called Superfamily a.4.10: N-terminal Zn binding domain of HIV integrase in SCOPe 2.07