SCOPe 2.05: Domain d1qssa2: 1qss A:423-831

Lineage for d1qssa2 (1qss A:423-831)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.1: DNA polymerase I [56673] (5 proteins)

6. Protein DNA polymerase I (Klenow fragment) [56674] (3 species)

7. Species Thermus aquaticus [TaxId:271] [56676] (26 PDB entries)

8. Domain d1qssa2: 1qss A:423-831 [42990]
   Other proteins in same PDB: d1qssa1
   protein/DNA complex; complexed with dg3, mg

Details for d1qssa2

PDB Entry: 1qss, 2.3 Å

PDB Description: ddgtp-trapped closed ternary complex of the large fragment of dna polymerase i from thermus aquaticus

PDB Compounds: (A:) DNA polymerase I

SCOPe Domain Sequences for d1qssa2:

Sequence; same for both SEQRES and ATOM records:

>d1qssa2 e.8.1.1 (A:423-831) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]}
eerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpf
nlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltklk
styidplpdlihprtgrlhtrfnqtatatgrlsssdpnlqnipvrtplgqrirrafiaee
gwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraa
ktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvet
lfgrrryvpdlearvksvreaaermafnmpvqgtaadlmklamvklfprleemgarmllq
vhdelvleapkeraeavarlakevmegvyplavplevevgigedwlsak

Timeline for d1qssa2:

• d1qssa2 first appeared (with stable ids) in SCOP 1.55
  
• d1qssa2 appears in SCOPe 2.04
  
• d1qssa2 appears in SCOPe 2.06
  
• d1qssa2 appears in the current release, SCOPe 2.08