Lineage for d6jmpa_ (6jmp A:)

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3029423Fold f.69: Perfringolysin N-terminal-like [418706] (1 superfamily)
    twisted 4-strand antiparallel beta sheet, surrounded by other helices and strands, complex topology
  4. 3029424Superfamily f.69.1: Perfringolysin N-terminal-like [418735] (2 families) (S)
  5. 3029425Family f.69.1.1: Perfringolysin N-terminal-like [418783] (9 proteins)
  6. 3029453Protein Pneumolysin N-terminal domain [419172] (1 species)
  7. 3029454Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [419283] (7 PDB entries)
  8. 3029455Domain d6jmpa_: 6jmp A: [390279]
    automated match to d5cr6d_
    complexed with gol

Details for d6jmpa_

PDB Entry: 6jmp (more details), 2.2 Å

PDB Description: crystal structure of a non-hemolytic pneumolysin from streptococcus pneumoniae strain st306
PDB Compounds: (A:) Thiol-activated cytolysin

SCOPe Domain Sequences for d6jmpa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6jmpa_ f.69.1.1 (A:) Pneumolysin N-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
mankavndfilamnydkkkllthqgesienrfikegnqlpdefvvierkkrslstntsdi
svtatndsrlypgallvvdetllennptllavdrapmtysidlpglassdsflqvedpsn
ssvrgavndllakwhqdygqvnnvparmqhekitahsmeqlkvkfgsdfekignsldidf
nsvhsgekqiqivnfkqiyytvsvdavknpgdvfqdtvtvedlrqrgisaerplvyissv
aygrqvylklettsksdeveaafeslikgvapqtewkqildntevkavilggdpssgarv
vtgkvdmvedliqegsrftadhpglpisyttsflrdnvvatfqnstdyvetkvtayrngd
llldhsgayvaqyyitwdelsydhqgkevltpkawdrngqdltahfttsiplkgnvrnls
vkirectglawewwrtvyektdlplvrkrtisiwgttlypqvedkvend

SCOPe Domain Coordinates for d6jmpa_:

Click to download the PDB-style file with coordinates for d6jmpa_.
(The format of our PDB-style files is described here.)

Timeline for d6jmpa_: