SCOPe 2.05: Domain d1ffub1: 1ffu B:7-146

Lineage for d1ffub1 (1ffu B:7-146)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
   core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids

4. Superfamily d.41.1: CO dehydrogenase molybdoprotein N-domain-like [54665] (2 families)

5. Family d.41.1.1: CO dehydrogenase molybdoprotein N-domain-like [54666] (6 proteins)

6. Protein Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain [54672] (2 species)

7. Species Hydrogenophaga pseudoflava [TaxId:47421] [54674] (2 PDB entries)

8. Domain d1ffub1: 1ffu B:7-146 [38593]
   Other proteins in same PDB: d1ffua1, d1ffua2, d1ffub2, d1ffuc1, d1ffuc2, d1ffud1, d1ffud2, d1ffue2, d1ffuf1, d1ffuf2
   complexed with cdp, fad, fes

Details for d1ffub1

PDB Entry: 1ffu, 2.35 Å

PDB Description: carbon monoxide dehydrogenase from hydrogenophaga pseudoflava which lacks the mo-pyranopterin moiety of the molybdenum cofactor

PDB Compounds: (B:) cutl, molybdoprotein of carbon monoxide dehydrogenase

SCOPe Domain Sequences for d1ffub1:

Sequence; same for both SEQRES and ATOM records:

>d1ffub1 d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
daearelalagmgasrlrkedarfiqgkgnyvddikmpgmlhmdivrapiahgrikkihk
daalampgvhavltaedlkplklhwmptlagdvaavladekvhfqmqevaiviaddryia
adaveavkveydelpvvidp

Timeline for d1ffub1:

• d1ffub1 first appeared (with stable ids) in SCOP 1.55
  
• d1ffub1 appears in SCOPe 2.04
  
• d1ffub1 appears in SCOPe 2.06
  
• d1ffub1 appears in the current release, SCOPe 2.08