Lineage for d6pyma_ (6pym A:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2404157Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2404158Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2404159Family b.47.1.1: Prokaryotic proteases [50495] (16 proteins)
  6. 2404359Protein automated matches [190306] (9 species)
    not a true protein
  7. 2404409Species Staphylococcus epidermidis [TaxId:176280] [227720] (6 PDB entries)
  8. 2404410Domain d6pyma_: 6pym A: [373014]
    automated match to d4jcna_
    mutant

Details for d6pyma_

PDB Entry: 6pym (more details), 1.2 Å

PDB Description: structure of active-site serine mutant of esp, serine protease from staphylococcus epidermidis
PDB Compounds: (A:) Glutamyl endopeptidase

SCOPe Domain Sequences for d6pyma_:

Sequence, based on SEQRES records: (download)

>d6pyma_ b.47.1.1 (A:) automated matches {Staphylococcus epidermidis [TaxId: 176280]}
vilpnnnrhqifnttqghydavsfiyipidggymsgsgvvvgeneiltnkhvvngakgnp
rnisvhpsaknendypngkfvgqeiipypgnsdlailrvspnehnqhigqvvkpatissn
tdtrinenitvtgypgdkplatmwesvgkvvyiggeelrydlstvggnagspvfngknqv
igihyggvdnkynssvyindfvqqflrnnipdiniq

Sequence, based on observed residues (ATOM records): (download)

>d6pyma_ b.47.1.1 (A:) automated matches {Staphylococcus epidermidis [TaxId: 176280]}
vilpnnnrhqifnttqghydavsfiyipgymsgsgvvvgeneiltnkhvvngakgnprni
svhpsaknendypngkfvgqeiipypgnsdlailrvspnehnqhigqvvkpatissntdt
rinenitvtgypgdkplatmwesvgkvvyiggeelrydlstvggnagspvfngknqvigi
hyggvdnkynssvyindfvqqflrnnipdiniq

SCOPe Domain Coordinates for d6pyma_:

Click to download the PDB-style file with coordinates for d6pyma_.
(The format of our PDB-style files is described here.)

Timeline for d6pyma_: