SCOPe 2.08: Domain d5upya1: 5upy A:1-486

Lineage for d5upya1 (5upy A:1-486)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.5: Inosine monophosphate dehydrogenase (IMPDH) [51412] (2 families)
   The phosphate moiety of substrate binds in the 'common' phosphate-binding site

5. Family c.1.5.0: automated matches [227276] (1 protein)
   not a true family

6. Protein automated matches [227084] (16 species)
   not a true protein

7. Species Listeria monocytogenes [TaxId:169963] [332777] (2 PDB entries)

8. Domain d5upya1: 5upy A:1-486 [345858]
   Other proteins in same PDB: d5upya2
   automated match to d4mz8b_
   complexed with cl, edo, gol, imp, q21

Details for d5upya1

PDB Entry: 5upy, 2.35 Å

PDB Description: crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from listeria monocytogenes in the complex with imp and q21

PDB Compounds: (A:) inosine-5'-monophosphate dehydrogenase

SCOPe Domain Sequences for d5upya1:

Sequence, based on SEQRES records:

>d5upya1 c.1.5.0 (A:1-486) automated matches {Listeria monocytogenes [TaxId: 169963]}
mwetkfakegltfddvllvpaksdvlpndvdlsvemapslklnvpiwsagmdtiteakma
iaiarqggigvvhknmsieqqaeeiekvkrsggllaaaavgitndtfvrveklieagvda
ividtahghsagvinkiseirqtfkdvvivagnvataegaralfevgvdivkvgigpgsi
cttrvvagvgvpqitaiydcatvarefgktiiadggikysgdivkalaaggnavmlgsml
agtdespgeteifqgrqfktyrgmgslaamehgskdryfqadakklvpegiegrvpykgs
vadiifqlvggirsgmgytgspdlrhlreeaafvrmtgaglreshphdiqitkeapnys

Sequence, based on observed residues (ATOM records):

>d5upya1 c.1.5.0 (A:1-486) automated matches {Listeria monocytogenes [TaxId: 169963]}
mwetkfakegltfddvllvpaksdvlpndvdlsvemapslklnvpiwsagmdtiteakma
iaiarqggigvvhknmsieqqaeeiekvkrsggllaaaavgitndtfvrveklieagvda
ividtahghsagvinkiseirqtfkdvvivagnvataegaralfevgvdivkvgigpgsi
cttrvvagvgvpqitaiydcatvarefgktiiadggikysgdivkalaaggnavmlgsml
agtdespgeteifqgrqfktyrgmgslaamehgklvpegiegrvpykgsvadiifqlvgg
irsgmgytgspdlrhlreeaafvrmtgaglreshphdiqitkeapnys

Timeline for d5upya1:

• d5upya1 first appeared in SCOPe 2.07