SCOPe 2.07: Domain d5y8ab1: 5y8a B:40-305

Lineage for d5y8ab1 (5y8a B:40-305)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.92: Chelatase-like [53799] (3 superfamilies)
   duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134

4. Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families)
   contains a long alpha helical insertion in the interdomain linker

5. Family c.92.2.0: automated matches [191548] (1 protein)
   not a true family

6. Protein automated matches [190944] (40 species)
   not a true protein

7. Species Burkholderia cenocepacia [TaxId:216591] [335925] (3 PDB entries)

8. Domain d5y8ab1: 5y8a B:40-305 [340183]
   Other proteins in same PDB: d5y8aa2, d5y8ab2
   automated match to d2r7ab_
   complexed with ca, hem

Details for d5y8ab1

PDB Entry: 5y8a, 2 Å

PDB Description: periplasmic heme-binding protein bhut in complex with two hemes (holo- 2 form)

PDB Compounds: (B:) Putative hemin transport system, substrate-binding protein

SCOPe Domain Sequences for d5y8ab1:

Sequence; same for both SEQRES and ATOM records:

>d5y8ab1 c.92.2.0 (B:40-305) automated matches {Burkholderia cenocepacia [TaxId: 216591]}
krviviggalaetafalggaetpryrlvgadttctypdaakrlpkvgyqralsaegllsl
rpdlvlasaeagpptaiaqvkgagvtvttfderhdvesvrakitgvaqaldvrdagaall
qrfdrdwqaardavaarvpggaqpprvlfvlnhtgtqalvagqrtaadamiryagarnam
qgfdhykplttealaaaapdvvlisdeglaavgghaallatpgfgatpagrarrvvslda
lfllgfgprlplavttlhrrlsdala

Timeline for d5y8ab1:

• d5y8ab1 first appeared in SCOPe 2.06
  
• d5y8ab1 appears in the current release, SCOPe 2.08