PDB entry 5y8a
View 5y8a on RCSB PDB site
Description: Periplasmic heme-binding protein BhuT in complex with two hemes (holo-2 form)
Class: transport protein
Keywords: metal transport, TRANSPORT PROTEIN
Deposited on
2017-08-20, released
2017-10-11
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-22, with a file datestamp of
2017-11-17.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Putative hemin transport system, substrate-binding protein
Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
Gene: hmuT, BCAM2628
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5y8aa1, d5y8aa2 - Chain 'B':
Compound: Putative hemin transport system, substrate-binding protein
Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
Gene: hmuT, BCAM2628
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5y8ab1, d5y8ab2 - Heterogens: HEM, CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5y8aA (A:)
gplgskrviviggalaetafalggaetpryrlvgadttctypdaakrlpkvgyqralsae
gllslrpdlvlasaeagpptaiaqvkgagvtvttfderhdvesvrakitgvaqaldvrda
gaallqrfdrdwqaardavaarvpggaqpprvlfvlnhtgtqalvagqrtaadamiryag
arnamqgfdhykplttealaaaapdvvlisdeglaavgghaallatpgfgatpagrarrv
vsldalfllgfgprlplavttlhrrlsdala
Sequence, based on observed residues (ATOM records): (download)
>5y8aA (A:)
gskrviviggalaetafalggaetpryrlvgadttctypdaakrlpkvgyqralsaegll
slrpdlvlasaeagpptaiaqvkgagvtvttfderhdvesvrakitgvaqaldvrdagaa
llqrfdrdwqaardavaarvpggaqpprvlfvlnhtgtqalvagqrtaadamiryagarn
amqgfdhykplttealaaaapdvvlisdeglaavgghaallatpgfgatpagrarrvvsl
dalfllgfgprlplavttlhrrlsdala
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5y8aB (B:)
gplgskrviviggalaetafalggaetpryrlvgadttctypdaakrlpkvgyqralsae
gllslrpdlvlasaeagpptaiaqvkgagvtvttfderhdvesvrakitgvaqaldvrda
gaallqrfdrdwqaardavaarvpggaqpprvlfvlnhtgtqalvagqrtaadamiryag
arnamqgfdhykplttealaaaapdvvlisdeglaavgghaallatpgfgatpagrarrv
vsldalfllgfgprlplavttlhrrlsdala
Sequence, based on observed residues (ATOM records): (download)
>5y8aB (B:)
gskrviviggalaetafalggaetpryrlvgadttctypdaakrlpkvgyqralsaegll
slrpdlvlasaeagpptaiaqvkgagvtvttfderhdvesvrakitgvaqaldvrdagaa
llqrfdrdwqaardavaarvpggaqpprvlfvlnhtgtqalvagqrtaadamiryagarn
amqgfdhykplttealaaaapdvvlisdeglaavgghaallatpgfgatpagrarrvvsl
dalfllgfgprlplavttlhrrlsdala