SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5uy6a1 (5uy6 A:161-448)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2195565Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. 2195566Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. 2199100Family d.144.1.0: automated matches [191359] (1 protein)
    not a true family
  6. 2199101Protein automated matches [190417] (25 species)
    not a true protein
  7. 2199241Species Human (Homo sapiens) [TaxId:9606] [187294] (808 PDB entries)
  8. 2289199Domain d5uy6a1: 5uy6 A:161-448 [332500]
    Other proteins in same PDB: d5uy6a2
    automated match to d2zv2a_
    complexed with 8r4

Details for d5uy6a1

PDB Entry: 5uy6 (more details), 1.7 Å

PDB Description: crystal structure of the human camkk2b
PDB Compounds: (A:) Calcium/calmodulin-dependent protein kinase kinase 2

SCOPe Domain Sequences for d5uy6a1:

Sequence, based on SEQRES records: (download)

>d5uy6a1 d.144.1.0 (A:161-448) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qlnqytlkdeigkgsygvvklaynendntyyamkvlskkklirqagfprrppprgtrpap
ggciqprgpieqvyqeiailkkldhpnvvklvevlddpnedhlymvfelvnqgpvmevpt
lkplsedqarfyfqdlikgieylhyqkiihrdikpsnllvgedghikiadfgvsnefkgs
dallsntvgtpafmapeslsetrkifsgkaldvwamgvtlycfvfgqcpfmderimclhs
kiksqalefpdqpdiaedlkdlitrmldknpesrivvpeiklhpwvtr

Sequence, based on observed residues (ATOM records): (download)

>d5uy6a1 d.144.1.0 (A:161-448) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qlnqytlkdeigkgsygvvklaynendntyyamkvlskkklirqagfprrpppgciqprg
pieqvyqeiailkkldhpnvvklvevlddpnedhlymvfelvnqgpvmevptlkplsedq
arfyfqdlikgieylhyqkiihrdikpsnllvgedghikiadfgvsnefkgsdallsntv
gtpafmapeslsetrkifsgkaldvwamgvtlycfvfgqcpfmderimclhskiksqale
fpdqpdiaedlkdlitrmldknpesrivvpeiklhpwvtr

SCOPe Domain Coordinates for d5uy6a1:

Click to download the PDB-style file with coordinates for d5uy6a1.
(The format of our PDB-style files is described here.)

Timeline for d5uy6a1:

  • d5uy6a1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-30

View in 3D
Domains from same chain:
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d5uy6a2