SCOPe 2.07: Domain d5l55r_: 5l55 R:

Lineage for d5l55r_ (5l55 R:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein Proteasome alpha subunit (non-catalytic) [56255] (10 species)
   contains an extension to the common fold at the N-terminus

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256264] (12 PDB entries)

8. Domain d5l55r_: 5l55 R: [325200]
   Other proteins in same PDB: d5l55a_, d5l55h_, d5l55i_, d5l55j_, d5l55k_, d5l55l_, d5l55m_, d5l55n_, d5l55o_, d5l55v_, d5l55w_, d5l55x_, d5l55y_, d5l55z_
   automated match to d1iruf_
   complexed with 6nv, cl, mes, mg

Details for d5l55r_

PDB Entry: 5l55, 2.9 Å

PDB Description: yeast 20s proteasome in complex with epoxyketone inhibitor 18

PDB Compounds: (R:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d5l55r_:

Sequence, based on SEQRES records:

>d5l55r_ d.153.1.4 (R:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Sequence, based on observed residues (ATOM records):

>d5l55r_ d.153.1.4 (R:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgelms
rpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewhssltlke
aellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekeaae

Timeline for d5l55r_:

• d5l55r_ first appeared in SCOPe 2.06
  
• d5l55r_ appears in the current release, SCOPe 2.08