SCOP 1.67: Domain d1vom_2: 1vom 2-33,80-747

Lineage for d1vom_2 (1vom 2-33,80-747)

1. Root: SCOP 1.67

2. Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (22 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.9: Motor proteins [52641] (3 proteins)

6. Protein Myosin S1, motor domain [52642] (5 species)
   common fold is interrupted with some all-alpha subdomains

7. Species Slime mold (Dictyostelium discoideum) [TaxId:44689] [52645] (18 PDB entries)

8. Domain d1vom_2: 1vom 2-33,80-747 [32174]
   Other proteins in same PDB: d1vom_1
   complexed with adp, mg, vo4

Details for d1vom_2

PDB Entry: 1vom, 1.9 Å

PDB Description: complex between dictyostelium myosin and mgadp and vanadate at 1.9a resolution

SCOP Domain Sequences for d1vom_2:

Sequence, based on SEQRES records:

>d1vom_2 c.37.1.9 (2-33,80-747) Myosin S1, motor domain {Slime mold (Dictyostelium discoideum)}
npihdrtsdyhkylkvkqgdsdlfkltvsdkrXrnpikfdgvedmselsylnepavfhnl
rvrynqdliytysglflvavnpfkripiytqemvdifkgrrrnevaphifaisdvayrsm
lddrqnqsllitgesgagktentkkviqylasvagrnqangsgvleqqilqanpileafg
nakttrnnnssrfgkfieiqfnnagfisgasiqsylleksrvvfqseternyhifyqlla
gataeekkalhlagpesfnylnqsgcvdikgvsdedefkitrqamdivgfsqeeqmsifk
iiagilhlgnikfekgagegavlkdktalnaastvfgvnpsvlekalmeprilagrdlva
qhlnvekssssrdalvkalygrlflwlvkkinnvlcseraayfigvldisgfeifkvnsf
eqlcinytneklqqffnhhmfkveqeeylkekinwtfidfgldsqatidlidgrqppgil
alldeqsvfpnatdntlitklhshfskknakyeeprfsktefgvthyagqvmyeiqdwle
knkdplqqdlelcfkdssdnvvtklfndpniasrakkganfitvaaqykeqlaslmatle
ttnphfvrciipnnkqlpakledkvvldqlrcngvlegiritrkgfpnriiyadfvkryy
llapnvprdaedsqkatdavlkhlnidpeqyrfgitkiffr

Sequence, based on observed residues (ATOM records):

>d1vom_2 c.37.1.9 (2-33,80-747) Myosin S1, motor domain {Slime mold (Dictyostelium discoideum)}
npihdrtsdyhkylkvkqgdsdlfkltvsdkrXrnpikfdgvedmselsylnepavfhnl
rvrynqdliytysglflvavnpfkripiytqemvdifkgrrrnevaphifaisdvayrsm
lddrqnqsllitgesgagktentkkviqylasvagrnqgvleqqilqanpileafgnakt
trnnnssrfgkfieiqfnnagfisgasiqsylleksrvvfqseternyhifyqllagata
eekkalhlagpesfnylnqsgcvdikgvsdedefkitrqamdivgfsqeeqmsifkiiag
ilhlgnikfekgagegavlkdktalnaastvfgvnpsvlekalmeprilagrdlvaqhln
vekssssrdalvkalygrlflwlvkkinnvlcseraayfigvldisgfeifkvnsfeqlc
inytneklqqffnhhmfkveqeeylkekinwtfidfgldsqatidlidgrqppgilalld
eqsvfpnatdntlitklhshfskknakyeeprfsktefgvthyagqvmyeiqdwleknkd
plqqdlelcfkdssdnvvtklfndpniasrakkganfitvaaqykeqlaslmatlettnp
hfvrciipnnkqlpakledkvvldqlrcngvlegiritrkgfpnriiyadfvkryyllap
vprdqkatnidpeqyrfgitkiffr

Timeline for d1vom_2:

• d1vom_2 first appeared (with stable ids) in SCOP 1.55
  
• d1vom_2 appears in SCOP 1.65
  
• d1vom_2 appears in SCOP 1.69
  
• d1vom_2 appears in the current release, SCOPe 2.08, called d1voma2