Lineage for d1vom_2 (1vom 2-33,80-747)

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 313180Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 313181Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (21 families) (S)
    division into families based on beta-sheet topologies
  5. 313890Family c.37.1.9: Motor proteins [52641] (3 proteins)
  6. 313921Protein Myosin S1, motor domain [52642] (4 species)
    common fold is interrupted with some all-alpha subdomains
  7. 313948Species Slime mold (Dictyostelium discoideum) [TaxId:44689] [52645] (18 PDB entries)
  8. 313951Domain d1vom_2: 1vom 2-33,80-747 [32174]
    Other proteins in same PDB: d1vom_1
    complexed with adp, mg, vo4

Details for d1vom_2

PDB Entry: 1vom (more details), 1.9 Å

PDB Description: complex between dictyostelium myosin and mgadp and vanadate at 1.9a resolution

SCOP Domain Sequences for d1vom_2:

Sequence, based on SEQRES records: (download)

>d1vom_2 c.37.1.9 (2-33,80-747) Myosin S1, motor domain {Slime mold (Dictyostelium discoideum)}
npihdrtsdyhkylkvkqgdsdlfkltvsdkrXrnpikfdgvedmselsylnepavfhnl
rvrynqdliytysglflvavnpfkripiytqemvdifkgrrrnevaphifaisdvayrsm
lddrqnqsllitgesgagktentkkviqylasvagrnqangsgvleqqilqanpileafg
nakttrnnnssrfgkfieiqfnnagfisgasiqsylleksrvvfqseternyhifyqlla
gataeekkalhlagpesfnylnqsgcvdikgvsdedefkitrqamdivgfsqeeqmsifk
iiagilhlgnikfekgagegavlkdktalnaastvfgvnpsvlekalmeprilagrdlva
qhlnvekssssrdalvkalygrlflwlvkkinnvlcseraayfigvldisgfeifkvnsf
eqlcinytneklqqffnhhmfkveqeeylkekinwtfidfgldsqatidlidgrqppgil
alldeqsvfpnatdntlitklhshfskknakyeeprfsktefgvthyagqvmyeiqdwle
knkdplqqdlelcfkdssdnvvtklfndpniasrakkganfitvaaqykeqlaslmatle
ttnphfvrciipnnkqlpakledkvvldqlrcngvlegiritrkgfpnriiyadfvkryy
llapnvprdaedsqkatdavlkhlnidpeqyrfgitkiffr

Sequence, based on observed residues (ATOM records): (download)

>d1vom_2 c.37.1.9 (2-33,80-747) Myosin S1, motor domain {Slime mold (Dictyostelium discoideum)}
npihdrtsdyhkylkvkqgdsdlfkltvsdkrXrnpikfdgvedmselsylnepavfhnl
rvrynqdliytysglflvavnpfkripiytqemvdifkgrrrnevaphifaisdvayrsm
lddrqnqsllitgesgagktentkkviqylasvagrnqgvleqqilqanpileafgnakt
trnnnssrfgkfieiqfnnagfisgasiqsylleksrvvfqseternyhifyqllagata
eekkalhlagpesfnylnqsgcvdikgvsdedefkitrqamdivgfsqeeqmsifkiiag
ilhlgnikfekgagegavlkdktalnaastvfgvnpsvlekalmeprilagrdlvaqhln
vekssssrdalvkalygrlflwlvkkinnvlcseraayfigvldisgfeifkvnsfeqlc
inytneklqqffnhhmfkveqeeylkekinwtfidfgldsqatidlidgrqppgilalld
eqsvfpnatdntlitklhshfskknakyeeprfsktefgvthyagqvmyeiqdwleknkd
plqqdlelcfkdssdnvvtklfndpniasrakkganfitvaaqykeqlaslmatlettnp
hfvrciipnnkqlpakledkvvldqlrcngvlegiritrkgfpnriiyadfvkryyllap
vprdqkatnidpeqyrfgitkiffr

SCOP Domain Coordinates for d1vom_2:

Click to download the PDB-style file with coordinates for d1vom_2.
(The format of our PDB-style files is described here.)

Timeline for d1vom_2:

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Domains from same chain:
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d1vom_1