SCOPe 2.06: Domain d5jqgd2: 5jqg D:244-431

Lineage for d5jqgd2 (5jqg D:244-431)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)

6. Protein Tubulin beta-subunit [55313] (2 species)

7. Species Cow (Bos taurus) [TaxId:9913] [64322] (11 PDB entries)
   Uniprot P02554

8. Domain d5jqgd2: 5jqg D:244-431 [317584]
   Other proteins in same PDB: d5jqga1, d5jqga2, d5jqgb1, d5jqgc1, d5jqgc2, d5jqgd1, d5jqge_, d5jqgf1, d5jqgf2
   automated match to d1sa0b2
   complexed with acp, ca, cl, gdp, gtp, mes, mg

Details for d5jqgd2

PDB Entry: 5jqg, 2.24 Å

PDB Description: an apo tubulin-rb-ttl complex structure used for side-by-side comparison

PDB Compounds: (D:) Tubulin beta chain

SCOPe Domain Sequences for d5jqgd2:

Sequence, based on SEQRES records:

>d5jqgd2 d.79.2.1 (D:244-431) Tubulin beta-subunit {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmmaac
dprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqdatad

Sequence, based on observed residues (ATOM records):

>d5jqgd2 d.79.2.1 (D:244-431) Tubulin beta-subunit {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfaplltvpeltqqmfdaknmmaacdprhgryltv
aavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsatfignsta
iqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyqdatad

Timeline for d5jqgd2:

• d5jqgd2 is new in SCOPe 2.06-stable
  
• d5jqgd2 appears in SCOPe 2.07
  
• d5jqgd2 appears in the current release, SCOPe 2.08