Lineage for d5dtzb1 (5dtz B:3-232)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2546826Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2546827Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2546828Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 2546832Protein Green fluorescent protein, GFP [54513] (5 species)
  7. 2546838Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (272 PDB entries)
    Uniprot P42212
  8. 2546982Domain d5dtzb1: 5dtz B:3-232 [313669]
    Other proteins in same PDB: d5dtza2, d5dtzb2, d5dtzc2, d5dtzd2
    automated match to d3st3a_
    complexed with peg

Details for d5dtzb1

PDB Entry: 5dtz (more details), 1.5 Å

PDB Description: crystal structure of rsfolder in the fluorescent on-state
PDB Compounds: (B:) Green fluorescent protein

SCOPe Domain Sequences for d5dtzb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5dtzb1 d.22.1.1 (B:3-232) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlv
ttlxvlcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnri
elkgidfkedgnilghkleynfnshnvyitadkqkngiksnfkirhnvedgsvqladhyq
qntpigdgpvllpdnhylstqsklskdpnekrdhmvllefvtaagith

SCOPe Domain Coordinates for d5dtzb1:

Click to download the PDB-style file with coordinates for d5dtzb1.
(The format of our PDB-style files is described here.)

Timeline for d5dtzb1: