Class c: Alpha and beta proteins (a/b) [51349] (117 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (9 families) |
Family c.1.8.1: Amylase, catalytic domain [51446] (21 proteins) members of the family may contain various insert subdomains in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain |
Protein Bacterial alpha-amylase [51447] (5 species) |
Species Pseudoalteromonas haloplanctis (Alteromonas haloplanctis) [51449] (9 PDB entries) |
Domain d1aqm_2: 1aqm 1-354 [28704] Other proteins in same PDB: d1aqm_1 complexed with ca, cl, trs |
PDB Entry: 1aqm (more details), 1.85 Å
SCOP Domain Sequences for d1aqm_2:
Sequence; same for both SEQRES and ATOM records: (download)
>d1aqm_2 c.1.8.1 (1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanctis (Alteromonas haloplanctis)} tpttfvhlfewnwqdvaqeceqylgpkgyaavqvsppnehitgsqwwtryqpvsyelqsr ggnraqfidmvnrcsaagvdiyvdtlinhmaagsgtgtagnsfgnksfpiyspqdfhesc tinnsdygndryrvqncelvgladldtasnyvqntiaayindlqaigvkgfrfdaskhva asdiqslmakvngspvvfqevidqggeavgaseylstglvtefkystelgntfrngslaw lsnfgegwgfmpsssavvfvdnhdnqrghggagnvitfedgrlydlanvfmlaypygypk vmssydfhgdtdaggpnvpvhnngnlecfasnwkcehrwsyiaggvdfrnntad
Timeline for d1aqm_2: