Lineage for Protein: Bacterial alpha-amylase

  1. Root: SCOP 1.63
  2. 235644Class c: Alpha and beta proteins (a/b) [51349] (117 folds)
  3. 235645Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 236226Superfamily c.1.8: (Trans)glycosidases [51445] (9 families) (S)
  5. 236227Family c.1.8.1: Amylase, catalytic domain [51446] (21 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 236305Protein Bacterial alpha-amylase [51447] (5 species)

Species:

  1. 236306Bacillus licheniformis [TaxId:1402] [51448] (4 PDB entries)
    1. Domain for 1bli:
    2. Domain for 1bpl:
    3. Domain for 1ob0:
    4. Domain for 1vjs:
  2. 236311Bacillus stearothermophilus [TaxId:1422] [51451] (1 PDB entry)
  3. 236313Bacillus subtilis [TaxId:1423] [51450] (1 PDB entry)
  4. 236315Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId:1390] [63903] (4 PDB entries)
    the N-terminal 300 residues are from B. amyloliquefaciens
    1. Domain for 1e3x:
    2. Domain for 1e3z:
    3. Domain for 1e40:
    4. Domain for 1e43:
  5. 236320Pseudoalteromonas haloplanctis (Alteromonas haloplanctis) [51449] (9 PDB entries)
    1. Domain for 1aqh:
    2. Domain for 1aqm:
    3. Domain for 1b0i:
    4. Domain for 1g94:
    5. Domain for 1g9h:
    6. Domain for 1jd7:
    7. Domain for 1jd9:
    8. Domain for 1kxh:
    9. Domain for 1l0p:

More info for Protein Bacterial alpha-amylase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Bacterial alpha-amylase from c.1.8.1: Amylase, catalytic domain: