Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily) 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465 |
Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules |
Family c.36.1.0: automated matches [227300] (1 protein) not a true family |
Protein automated matches [227126] (15 species) not a true protein |
Species Pseudomonas putida [TaxId:303] [254984] (35 PDB entries) |
Domain d5deid1: 5dei D:3-182 [276920] Other proteins in same PDB: d5deia2, d5deib2, d5deic2, d5deid2 automated match to d2fwna2 complexed with bct, ca, mg, tdp |
PDB Entry: 5dei (more details), 1.3 Å
SCOPe Domain Sequences for d5deid1:
Sequence; same for both SEQRES and ATOM records: (download)
>d5deid1 c.36.1.0 (D:3-182) automated matches {Pseudomonas putida [TaxId: 303]} asvhgttyellrrqgidtvfgnpgsnelpflkdfpedfryilalqeacvvgiadgyaqas rkpafinlhsaagtgnamgalsnawnshsplivtagqqtramigvealltnvdaanlprp lvkwsyepasaaevphamsraihmasmapqgpvylsvpyddwdkdadpqshhlfdrhvss
Timeline for d5deid1: