SCOPe 2.07: Domain d4ud6s_: 4ud6 S:

Lineage for d4ud6s_ (4ud6 S:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (8 species)
   not a true protein

7. Species Desulfovibrio fructosivorans [TaxId:596151] [270659] (3 PDB entries)

8. Domain d4ud6s_: 4ud6 S: [270664]
   Other proteins in same PDB: d4ud6a_, d4ud6b_, d4ud6c_
   automated match to d1yrqh_
   complexed with f3s, fco, gol, mg, ni, sf4

Details for d4ud6s_

PDB Entry: 4ud6, 2.12 Å

PDB Description: structure of methylviologen-treated anaerobically purified d. fructosovorans nife-hydrogenase

PDB Compounds: (S:) Nickel-dependent hydrogenase large subunit

SCOPe Domain Sequences for d4ud6s_:

Sequence; same for both SEQRES and ATOM records:

>d4ud6s_ e.18.1.1 (S:) automated matches {Desulfovibrio fructosivorans [TaxId: 596151]}
ptpqstftgpivvdpitrieghlrimvevengkvkdawsssqlfrgleiilkgrdprdaq
hftqracgvctyvhalassrcvddavkvsipanarmmrnlvmasqylhdhlvhfyhlhal
dwvdvtaalkadpnkaaklaasiaparpgnsakalkavqdklkafvesgqlgiftnayfl
gghkayylppevdliatahylealhmqvkaasamailggknphtqftvvggcsnyqgltk
dplanylalskevcqfvnecyipdllavagfykdwggiggtsnylafgefatddsspekh
latsqfpsgvitgrdlgkvdnvdlgaiyedvkyswyapggdgkhpydgvtdpkytklddk
dhyswmkaprykgkamevgplartfiayakgqpdfkkvvdmvlgklsvpatalhstlgrt
aargietaivcanmekwikemadsgakdntlcakwempeeskgvgladaprgalshwiri
kgkkidnfqlvvpstwnlgprgaqgdkspveealigtpiadpkrpveilrtvhafdpcia
cgvh

Timeline for d4ud6s_:

• d4ud6s_ first appeared in SCOPe 2.05
  
• d4ud6s_ appears in SCOPe 2.06
  
• d4ud6s_ appears in the current release, SCOPe 2.08