SCOPe 2.06: Domain d2wjpa1: 2wjp A:1-93

Lineage for d2wjpa1 (2wjp A:1-93)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.5: MurCD N-terminal domain [51983] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; incomplete Rossmann-like fold; binds UDP group

4. Superfamily c.5.1: MurCD N-terminal domain [51984] (2 families)

5. Family c.5.1.0: automated matches [254240] (1 protein)
   not a true family

6. Protein automated matches [254548] (5 species)
   not a true protein

7. Species Escherichia coli [TaxId:668369] [255649] (2 PDB entries)

8. Domain d2wjpa1: 2wjp A:1-93 [244147]
   Other proteins in same PDB: d2wjpa2, d2wjpa3, d2wjpa4
   automated match to d4uaga1
   complexed with azi, cl, d17, dms, so4

Details for d2wjpa1

PDB Entry: 2wjp, 1.6 Å

PDB Description: crystal structure of murd ligase in complex with d-glu containing rhodanine inhibitor

PDB Compounds: (A:) udp-n-acetylmuramoylalanine--d-glutamate ligase

SCOPe Domain Sequences for d2wjpa1:

Sequence; same for both SEQRES and ATOM records:

>d2wjpa1 c.5.1.0 (A:1-93) automated matches {Escherichia coli [TaxId: 668369]}
adyqgknvviiglgltglscvdfflargvtprvmdtrmtppgldklpeaverhtgslnde
wlmaadlivaspgialahpslsaaadagieivg

Timeline for d2wjpa1:

• d2wjpa1 first appeared in SCOPe 2.04
  
• d2wjpa1 appears in SCOPe 2.05
  
• d2wjpa1 appears in SCOPe 2.07
  
• d2wjpa1 appears in the current release, SCOPe 2.08