Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) automatically mapped to Pfam PF00016 |
Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins) N-terminal domain is alpha+beta |
Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species) |
Species Rice (Oryza sativa) [TaxId:4530] [117390] (5 PDB entries) Uniprot P12089 |
Domain d3axmd2: 3axm D:151-463 [198957] Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_ automated match to d1wdda1 complexed with 6pg, mg |
PDB Entry: 3axm (more details), 1.65 Å
SCOPe Domain Sequences for d3axmd2:
Sequence, based on SEQRES records: (download)
>d3axmd2 c.1.14.1 (D:151-463) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]} pphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsqp fmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdyl tggftantslahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihagt vvgklegeremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpal teifgddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiirsack wspelaaaceiwk
>d3axmd2 c.1.14.1 (D:151-463) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]} pphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsqp fmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdyl tggftantslahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihagt vveremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpalteifg ddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiirsackwspel aaaceiwk
Timeline for d3axmd2: