Lineage for d2y1ha_ (2y1h A:)

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1336838Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1341467Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 1342051Family c.1.9.0: automated matches [191327] (1 protein)
    not a true family
  6. 1342052Protein automated matches [190150] (16 species)
    not a true protein
  7. 1342088Species Human (Homo sapiens) [TaxId:9606] [189102] (2 PDB entries)
  8. 1342090Domain d2y1ha_: 2y1h A: [196394]
    automated match to d2gzxa_
    complexed with edo, ni, po4, zn

Details for d2y1ha_

PDB Entry: 2y1h (more details), 2.5 Å

PDB Description: crystal structure of the human tatd-domain protein 3 (tatdn3)
PDB Compounds: (A:) putative deoxyribonuclease tatdn3

SCOPe Domain Sequences for d2y1ha_:

Sequence, based on SEQRES records: (download)

>d2y1ha_ c.1.9.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mgvglvdchchlsapdfdrdlddvlekakkanvvalvavaehsgefekimqlseryngfv
lpclgvhpvqglppedqrsvtlkdldvalpiienykdrllaigevgldfsprfagtgeqk
eeqrqvlirqiqlakrlnlpvnvhsrsagrptinllqeqgaekvllhafdgrpsvamegv
ragyffsippsiirsgqkqklvkqlpltsicletdspalgpekqvrnepwnisisaeyia
qvkgisveevievttqnalklfpklrhll

Sequence, based on observed residues (ATOM records): (download)

>d2y1ha_ c.1.9.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mgvglvdchchlsapdfdrdlddvlekakkanvvalvavaehsgefekimqlseryngfv
lpclgvhpvqrsvtlkdldvalpiienykdrllaigevgldfsprfagtgeqkeeqrqvl
irqiqlakrlnlpvnvhsrsagrptinllqeqgaekvllhafdgrpsvamegvragyffs
ippsiirsgqkqklvkqlpltsicletdspalgpekqvrnepwnisisaeyiaqvkgisv
eevievttqnalklfpklrhll

SCOPe Domain Coordinates for d2y1ha_:

Click to download the PDB-style file with coordinates for d2y1ha_.
(The format of our PDB-style files is described here.)

Timeline for d2y1ha_: