SCOPe 2.08: Domain d2y1ha1: 2y1h A:5-272

Lineage for d2y1ha1 (2y1h A:5-272)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.0: automated matches [191327] (1 protein)
   not a true family

6. Protein automated matches [190150] (36 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [189102] (8 PDB entries)

8. Domain d2y1ha1: 2y1h A:5-272 [196394]
   Other proteins in same PDB: d2y1ha2
   automated match to d2gzxa_
   complexed with edo, ni, po4, zn

Details for d2y1ha1

PDB Entry: 2y1h, 2.5 Å

PDB Description: crystal structure of the human tatd-domain protein 3 (tatdn3)

PDB Compounds: (A:) putative deoxyribonuclease tatdn3

SCOPe Domain Sequences for d2y1ha1:

Sequence, based on SEQRES records:

>d2y1ha1 c.1.9.0 (A:5-272) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gvglvdchchlsapdfdrdlddvlekakkanvvalvavaehsgefekimqlseryngfvl
pclgvhpvqglppedqrsvtlkdldvalpiienykdrllaigevgldfsprfagtgeqke
eqrqvlirqiqlakrlnlpvnvhsrsagrptinllqeqgaekvllhafdgrpsvamegvr
agyffsippsiirsgqkqklvkqlpltsicletdspalgpekqvrnepwnisisaeyiaq
vkgisveevievttqnalklfpklrhll

Sequence, based on observed residues (ATOM records):

>d2y1ha1 c.1.9.0 (A:5-272) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gvglvdchchlsapdfdrdlddvlekakkanvvalvavaehsgefekimqlseryngfvl
pclgvhpvqrsvtlkdldvalpiienykdrllaigevgldfsprfagtgeqkeeqrqvli
rqiqlakrlnlpvnvhsrsagrptinllqeqgaekvllhafdgrpsvamegvragyffsi
ppsiirsgqkqklvkqlpltsicletdspalgpekqvrnepwnisisaeyiaqvkgisve
evievttqnalklfpklrhll

Timeline for d2y1ha1:

• d2y1ha1 first appeared in SCOPe 2.02, called d2y1ha_
  
• d2y1ha1 appears in SCOPe 2.07