SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families)
Family c.52.1.0: automated matches [191531] (1 protein)
not a true family
Protein automated matches [190900] (3 species)
not a true protein

Species:

Archaeoglobus fulgidus [TaxId:2234] [225641] (2 PDB entries)
1. Domains for 2wcw:
  1. Domain d2wcwa_: 2wcw A: [206766]
    automated match to d1ob8b_
    complexed with act, nh4
  2. Domain d2wcwb_: 2wcw B: [206767]
    automated match to d1ob8b_
    complexed with act, nh4
  3. Domain d2wcwc_: 2wcw C: [206768]
    automated match to d1ob8b_
    complexed with act, nh4
  4. Domain d2wcwd_: 2wcw D: [206769]
    automated match to d1ob8b_
    complexed with act, nh4
2. Domains for 2wcz:
  1. Domain d2wcza_: 2wcz A: [206771]
    automated match to d1ob8b_
    complexed with cl
  2. Domain d2wczb_: 2wcz B: [206772]
    automated match to d1ob8b_
    complexed with cl
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346309] (1 PDB entry)
- Domain for 3zef:
  - Domain d3zefb2: 3zef B:1653-1825 [345046]
    Other proteins in same PDB: d3zefa1, d3zefa2, d3zefb1, d3zefb3, d3zefb4, d3zefb5, d3zefd1, d3zefd2
    automated match to d4i43b3
    protein/RNA complex
Escherichia coli K-12 [TaxId:83333] [188330] (1 PDB entry)
- Domains for 3c0u:
  1. Domain d3c0ua1: 3c0u A:2-180 [172975]
    Other proteins in same PDB: d3c0ua2, d3c0ub2
    automated match to d2g3wa1
    complexed with cl, so4
  2. Domain d3c0ub1: 3c0u B:2-180 [172976]
    Other proteins in same PDB: d3c0ua2, d3c0ub2
    automated match to d2g3wa1
    complexed with cl, so4

More info for Protein automated matches from c.52.1.0: automated matches

Timeline for Protein automated matches from c.52.1.0: automated matches:

Protein automated matches from c.52.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.52.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from c.52.1.0: automated matches appears in the current release, SCOPe 2.08