![]() | Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
![]() | Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies) core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest |
![]() | Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families) ![]() |
![]() | Family c.52.1.36: Splicing factor Prp8 endonuclease-like domain [345968] (1 protein) Pfam PF10596 Likely homology to endonuclease domains discussed in PubMed 21441348, PubMed 23354046 |
![]() | Protein Pre-mRNA splicing factor 8, Prp8 / Spp42 [346085] (2 species) |
![]() | Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [346307] (1 PDB entry) |
![]() | Domain d4i43b3: 4i43 B:1653-1838 [345296] Other proteins in same PDB: d4i43a1, d4i43a2, d4i43b1, d4i43b2, d4i43b4, d4i43b5 protein/RNA complex |
PDB Entry: 4i43 (more details), 2 Å
SCOPe Domain Sequences for d4i43b3:
Sequence, based on SEQRES records: (download)
>d4i43b3 c.52.1.36 (B:1653-1838) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]} lwqkihesivfdicqildgeldvlqiesvtketvhprksykmnssaaditmesvhewevs kpsllhetndsfkglitnkmwfdvqlrygdydshdisryvrakfldyttdnvsmypsptg vmigidlaynmydaygnwfnglkpliqnsmrtimkanpalyvlrerirkglqiyqssvqe pflnss
>d4i43b3 c.52.1.36 (B:1653-1838) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]} lwqkihesivfdicqildgeldvlqiesvtketvhprksykmnssaaditmesvhewevs kpsllhetndsfkglitnkmwfdvqlrygdydshdisryvrakfldyttdnvsmypsptg vmigidlaynmydaygnwfnglkpliqnsmrtimkanpalyvlrerirkglqiyqepfln ss
Timeline for d4i43b3:
![]() Domains from same chain: (mouse over for more information) d4i43b1, d4i43b2, d4i43b4, d4i43b5 |