Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1645809Fold d.37: CBS-domain pair [54630] (1 superfamily)
    duplication: tandem repeat of two beta-X-beta-alpha-beta(2)-alpha motifs of similar sequences; 4 layers: a/b/b/a
  4. 1645810Superfamily d.37.1: CBS-domain pair [54631] (2 families) (S)
  5. 1645811Family d.37.1.1: CBS-domain pair [54632] (21 proteins)
    Pfam PF00571; pairs of CBS domains dimerize to form a stable globular domain, a.k.a. Bateman domain
  6. 1645937Protein automated matches [190627] (6 species)
    not a true protein

Species:

  1. 1645938Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [231218] (4 PDB entries)
    1. Domains for 2qr1:
      1. 1645943Domain d2qr1e1: 2qr1 E:3-181 [231219]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_
        automated match to d2ooxe1
        complexed with adp
      2. 1645944Domain d2qr1e2: 2qr1 E:182-334 [231226]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_
        automated match to d2ooxe2
        complexed with adp
      3. 1645945Domain d2qr1g1: 2qr1 G:1-181 [231220]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_
        automated match to d2ooxe1
        complexed with adp
      4. 1645946Domain d2qr1g2: 2qr1 G:182-334 [231225]
        Other proteins in same PDB: d2qr1a_, d2qr1b_, d2qr1c_, d2qr1d_
        automated match to d2ooxe2
        complexed with adp
    2. Domains for 2qrc:
      1. 1645947Domain d2qrce1: 2qrc E:3-181 [231221]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_
        automated match to d2ooxe1
        complexed with adp, amp
      2. 1645948Domain d2qrce2: 2qrc E:182-334 [231228]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_
        automated match to d2ooxe2
        complexed with adp, amp
      3. 1645949Domain d2qrcg1: 2qrc G:1-181 [231222]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_
        automated match to d2ooxe1
        complexed with adp, amp
      4. 1645950Domain d2qrcg2: 2qrc G:182-334 [231229]
        Other proteins in same PDB: d2qrca_, d2qrcb_, d2qrcc_, d2qrcd_
        automated match to d2ooxe2
        complexed with adp, amp
    3. Domains for 2qrd:
      1. 1645939Domain d2qrde1: 2qrd E:2-181 [231224]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_
        automated match to d2ooxe1
        complexed with adp, atp
      2. 1645940Domain d2qrde2: 2qrd E:182-334 [231230]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_
        automated match to d2ooxe2
        complexed with adp, atp
      3. 1645941Domain d2qrdg1: 2qrd G:1-181 [231223]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_
        automated match to d2ooxe1
        complexed with adp, atp
      4. 1645942Domain d2qrdg2: 2qrd G:182-334 [231227]
        Other proteins in same PDB: d2qrda_, d2qrdb_, d2qrdc_, d2qrdd_
        automated match to d2ooxe2
        complexed with adp, atp
    4. Domains for 2qre:
      1. 1645951Domain d2qree1: 2qre E:2-181 [238834]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_
        automated match to d2ooxe1
        complexed with amz
      2. 1645952Domain d2qree2: 2qre E:182-316 [238835]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_
        automated match to d2ooxe2
        complexed with amz
      3. 1645953Domain d2qreg1: 2qre G:2-181 [238836]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_
        automated match to d2ooxe1
        complexed with amz
      4. 1645954Domain d2qreg2: 2qre G:182-316 [238837]
        Other proteins in same PDB: d2qrea_, d2qreb_, d2qrec_, d2qred_
        automated match to d2ooxe2
        complexed with amz
  2. 1645955Geobacillus kaustophilus [TaxId:235909] [188209] (1 PDB entry)
  3. 1645958Human (Homo sapiens) [TaxId:9606] [187902] (3 PDB entries)
    1. Domains for 2j9l:
      1. 1645959Domain d2j9lb_: 2j9l B: [161469]
        Other proteins in same PDB: d2j9la1
        automated match to d2j9la1
        complexed with atp, cl
      2. 1645960Domain d2j9lc_: 2j9l C: [161470]
        Other proteins in same PDB: d2j9la1
        automated match to d2j9la1
        complexed with atp, cl
      3. 1645961Domain d2j9ld_: 2j9l D: [161471]
        Other proteins in same PDB: d2j9la1
        automated match to d2j9la1
        complexed with atp, cl
      4. 1645962Domain d2j9le_: 2j9l E: [161472]
        Other proteins in same PDB: d2j9la1
        automated match to d2j9la1
        complexed with atp, cl
      5. 1645963Domain d2j9lf_: 2j9l F: [161473]
        Other proteins in same PDB: d2j9la1
        automated match to d2j9la1
        complexed with atp, cl
    2. Domains for 2ja3:
      1. 1645968Domain d2ja3a_: 2ja3 A: [242201]
        automated match to d2j9lc_
        complexed with adp
      2. 1645969Domain d2ja3b_: 2ja3 B: [242202]
        automated match to d2j9lc_
        complexed with adp
      3. 1645970Domain d2ja3c_: 2ja3 C: [242203]
        automated match to d2j9lc_
        complexed with adp
      4. 1645971Domain d2ja3d_: 2ja3 D: [242204]
        automated match to d2j9lc_
        complexed with adp
      5. 1645972Domain d2ja3e_: 2ja3 E: [242205]
        automated match to d2j9lc_
        complexed with adp
      6. 1645973Domain d2ja3f_: 2ja3 F: [242206]
        automated match to d2j9lc_
        complexed with adp
    3. Domains for 4cfe:
      1. 1645964Domain d4cfee1: 4cfe E:27-182 [251370]
        automated match to d2v8qe2
        complexed with 992, amp, stu
      2. 1645965Domain d4cfee2: 4cfe E:183-325 [251371]
        automated match to d2v8qe1
        complexed with 992, amp, stu
      3. 1645966Domain d4cfef1: 4cfe F:27-182 [251372]
        automated match to d2v8qe2
        complexed with 992, amp, stu
      4. 1645967Domain d4cfef2: 4cfe F:183-325 [251373]
        automated match to d2v8qe1
        complexed with 992, amp, stu
  4. 1645974Pyrococcus horikoshii [TaxId:53953] [188263] (1 PDB entry)
  5. 1645976Sulfolobus tokodaii [TaxId:273063] [187663] (1 PDB entry)
  6. 1645978Thermus thermophilus HB8 [TaxId:300852] [231686] (1 PDB entry)

More info for Protein automated matches from d.37.1.1: CBS-domain pair

Timeline for Protein automated matches from d.37.1.1: CBS-domain pair: