Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) |
Family c.1.4.0: automated matches [191310] (1 protein) not a true family |
Protein automated matches [190048] (11 species) not a true protein |
Aerococcus viridans [TaxId:1377] [187639] (5 PDB entries) |
Domain d2du2a_: 2du2 A: [163695] automated match to d1tb3a1 complexed with fmn |
Domain d2du2b_: 2du2 B: [163696] automated match to d1tb3a1 complexed with fmn |
Domain d2du2c_: 2du2 C: [163697] automated match to d1tb3a1 complexed with fmn |
Domain d2du2d_: 2du2 D: [163698] automated match to d1tb3a1 complexed with fmn |
Domain d2e77a_: 2e77 A: [163884] automated match to d1tb3a1 complexed with fmn, pyr |
Domain d2e77b_: 2e77 B: [163885] automated match to d1tb3a1 complexed with fmn, pyr |
Domain d2e77c_: 2e77 C: [163886] automated match to d1tb3a1 complexed with fmn, pyr |
Domain d2e77d_: 2e77 D: [163887] automated match to d1tb3a1 complexed with fmn, pyr |
Domain d2j6xa_: 2j6x A: [165919] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xb_: 2j6x B: [165920] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xc_: 2j6x C: [165921] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xd_: 2j6x D: [165922] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xe_: 2j6x E: [165923] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xf_: 2j6x F: [165924] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xg_: 2j6x G: [165925] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2j6xh_: 2j6x H: [165926] automated match to d1tb3a1 complexed with fmn, zn |
Domain d2nlia_: 2nli A: [166290] automated match to d1tb3a1 complexed with fmn, lac, peo |
Domain d2nlib_: 2nli B: [166291] automated match to d1tb3a1 complexed with fmn, lac, peo |
Domain d2zfaa_: 2zfa A: [171191] automated match to d1tb3a1 complexed with edo, fmn |
Domain d2zfab_: 2zfa B: [171192] automated match to d1tb3a1 complexed with edo, fmn |
Burkholderia pseudomallei [TaxId:28450] [188818] (1 PDB entry) |
Domain d3gkaa_: 3gka A: [176719] automated match to d1gwja_ complexed with fmn |
Domain d3gkab_: 3gka B: [176720] automated match to d1gwja_ complexed with fmn |
Human (Homo sapiens) [TaxId:9606] [189110] (1 PDB entry) |
Domain d2w0ua_: 2w0u A: [168987] automated match to d1al7a_ complexed with c7c, fmn |
Domain d2w0ub_: 2w0u B: [168988] automated match to d1al7a_ complexed with c7c, fmn |
Domain d2w0uc_: 2w0u C: [168989] automated match to d1al7a_ complexed with c7c, fmn |
Domain d2w0ud_: 2w0u D: [168990] automated match to d1al7a_ complexed with c7c, fmn |
Norway rat (Rattus norvegicus) [TaxId:10116] [186769] (1 PDB entry) |
Domain d1tb3b_: 1tb3 B: [119206] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Domain d1tb3c_: 1tb3 C: [119207] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Domain d1tb3d_: 1tb3 D: [119208] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Domain d1tb3e_: 1tb3 E: [119209] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Domain d1tb3f_: 1tb3 F: [119210] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Domain d1tb3g_: 1tb3 G: [119211] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Domain d1tb3h_: 1tb3 H: [119212] Other proteins in same PDB: d1tb3a1 automated match to d1gyla_ complexed with acy, fmn |
Pseudomonas putida [TaxId:303] [187793] (12 PDB entries) |
Domain d2h8xa_: 2h8x A: [165015] automated match to d1z41a1 complexed with fmn, so4 |
Domain d2h8za_: 2h8z A: [165016] automated match to d1z41a1 complexed with 8cm, fmn, so4 |
Domain d2h90a_: 2h90 A: [165017] automated match to d1z41a1 complexed with bu3, cou, fmn, so4 |
Domain d3l5la_: 3l5l A: [179965] automated match to d1z41a1 complexed with bu3, fmn, so4 |
Domain d3l5ma_: 3l5m A: [179966] automated match to d1z41a1 complexed with bu3, cou, fmn, so4 |
Domain d3l65a_: 3l65 A: [179998] automated match to d1z41a1 complexed with bu3, fmn, so4; mutant |
Domain d3l66a_: 3l66 A: [179999] automated match to d1z41a1 complexed with bu3, cou, fmn, so4 |
Domain d3l67a_: 3l67 A: [180000] automated match to d1z41a1 complexed with bu3, fmn, so4 |
Domain d3l68a_: 3l68 A: [180001] automated match to d1z41a1 complexed with bu3, cou, fmn, so4 |
Domain d3n14a_: 3n14 A: [181770] automated match to d1z41a1 complexed with bu3, fmn, so4 |
Domain d3n16a_: 3n16 A: [181771] automated match to d1z41a1 complexed with bu3, fmn, so4 |
Domain d3n19b_: 3n19 B: [181772] automated match to d1z41a1 complexed with fnr, so4 |
Domain d3n19d_: 3n19 D: [181773] automated match to d1z41a1 complexed with fnr, so4 |
Shewanella oneidensis [TaxId:211586] [187764] (3 PDB entries) |
Domain d2gq8a_: 2gq8 A: [164797] automated match to d1gwja_ complexed with ac6, bog, fmn, so4, trs |
Domain d2gq9a_: 2gq9 A: [164798] automated match to d1gwja_ complexed with fmn, hba, so4 |
Domain d2gqaa_: 2gqa A: [164799] automated match to d1gwja_ complexed with fmn, so4 |
Shewanella oneidensis [TaxId:70863] [187761] (1 PDB entry) |
Domain d2goua_: 2gou A: [164788] automated match to d1gwja_ complexed with bog, fmn, pe4, so4, trs |
Thermoanaerobacter pseudethanolicus [TaxId:340099] [189163] (2 PDB entries) |
Domain d3krua_: 3kru A: [179624] automated match to d1z41a1 complexed with act, fmn |
Domain d3krub_: 3kru B: [179625] automated match to d1z41a1 complexed with act, fmn |
Domain d3kruc_: 3kru C: [179626] automated match to d1z41a1 complexed with act, fmn |
Domain d3krud_: 3kru D: [179627] automated match to d1z41a1 complexed with act, fmn |
Domain d3krza_: 3krz A: [179635] automated match to d1z41a1 complexed with fmn, txd |
Domain d3krzb_: 3krz B: [179636] automated match to d1z41a1 complexed with fmn, txd |
Domain d3krzc_: 3krz C: [179637] automated match to d1z41a1 complexed with fmn, txd |
Domain d3krzd_: 3krz D: [179638] automated match to d1z41a1 complexed with fmn, txd |
Thermus scotoductus [TaxId:37636] [189238] (2 PDB entries) |
Domain d3hf3a_: 3hf3 A: [177456] automated match to d1z41a1 complexed with fmn, so4 |
Domain d3hf3b_: 3hf3 B: [177457] automated match to d1z41a1 complexed with fmn, so4 |
Domain d3hf3c_: 3hf3 C: [177458] automated match to d1z41a1 complexed with fmn, so4 |
Domain d3hf3d_: 3hf3 D: [177459] automated match to d1z41a1 complexed with fmn, so4 |
Domain d3hgja_: 3hgj A: [177543] automated match to d1z41a1 complexed with fmn, hba |
Domain d3hgjb_: 3hgj B: [177544] automated match to d1z41a1 complexed with fmn, hba |
Domain d3hgjc_: 3hgj C: [177545] automated match to d1z41a1 complexed with fmn, hba |
Domain d3hgjd_: 3hgj D: [177546] automated match to d1z41a1 complexed with fmn, hba |
Trypanosoma cruzi [TaxId:5693] [189890] (2 PDB entries) |
Domain d3atya_: 3aty A: [172335] automated match to d1icpa_ complexed with fmn |
Domain d3atyb_: 3aty B: [172336] automated match to d1icpa_ complexed with fmn |
Domain d3atza_: 3atz A: [172337] automated match to d1icpa_ complexed with fmn, hba |
Domain d3atzb_: 3atz B: [172338] automated match to d1icpa_ complexed with fmn, hba |
Domain d3atzc_: 3atz C: [172339] automated match to d1icpa_ complexed with fmn, hba |
Domain d3atzd_: 3atz D: [172340] automated match to d1icpa_ complexed with fmn, hba |
Trypanosome (Trypanosoma brucei) [TaxId:5691] [186962] (1 PDB entry) |
Domain d2b4gb_: 2b4g B: [127830] Other proteins in same PDB: d2b4ga1 automated match to d1dora_ complexed with br, fmn, gol, oro |
Domain d2b4gc_: 2b4g C: [127831] Other proteins in same PDB: d2b4ga1 automated match to d1dora_ complexed with br, fmn, gol, oro |
Domain d2b4gd_: 2b4g D: [127832] Other proteins in same PDB: d2b4ga1 automated match to d1dora_ complexed with br, fmn, gol, oro |
Timeline for Protein automated matches from c.1.4.0: automated matches: