Lineage for d3rk0a1 (3rk0 A:4-229)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2860044Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2861263Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families) (S)
    share similar mode of ligand (Adenosine group) binding
    can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group
  5. 2861264Family c.26.2.1: N-type ATP pyrophosphatases [52403] (9 proteins)
  6. 2861379Protein Putative N-type ATP pyrophosphatase PF0828 [102264] (1 species)
  7. 2861380Species Pyrococcus furiosus [TaxId:2261] [102265] (5 PDB entries)
  8. 2861384Domain d3rk0a1: 3rk0 A:4-229 [184998]
    Other proteins in same PDB: d3rk0a2
    automated match to d1ru8a_
    complexed with amp

    has additional subdomain(s) that are not in the common domain

Details for d3rk0a1

PDB Entry: 3rk0 (more details), 2.4 Å

PDB Description: X-ray crystal Structure of the putative N-type ATP pyrophosphatase (PF0828) in complex with AMP from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR23
PDB Compounds: (A:) N-type ATP pyrophosphatase superfamily

SCOPe Domain Sequences for d3rk0a1:

Sequence, based on SEQRES records: (download)

>d3rk0a1 c.26.2.1 (A:4-229) Putative N-type ATP pyrophosphatase PF0828 {Pyrococcus furiosus [TaxId: 2261]}
ladvavlysggkdsnyalywaiknrfsvkflvtmvseneesymyhtinanltdlqaralg
iplvkgftqgekekevedlkrvlsglkiqgivagalaskyqrkriekvakelglevytpa
wgrdakeymrellnlgfkimvvgvsaygldeswlgrildesaleelitlnekykvhvage
ggefetfvldmplfkykivvdkakkvwepctssgkliieeahlesk

Sequence, based on observed residues (ATOM records): (download)

>d3rk0a1 c.26.2.1 (A:4-229) Putative N-type ATP pyrophosphatase PF0828 {Pyrococcus furiosus [TaxId: 2261]}
ladvavlysggkdsnyalywaiknrfsvkflvtmvsenemyhtinanltdlqaralgipl
vkgftkevedlkrvlsglkiqgivagalaskyqrkriekvakelglevytpardakeymr
ellnlgfkimvvgvsaygldeswlgrildesaleelitlnekykvhvageggefetfvld
mplfkykivvdkakkvtssgkliieeahlesk

SCOPe Domain Coordinates for d3rk0a1:

Click to download the PDB-style file with coordinates for d3rk0a1.
(The format of our PDB-style files is described here.)

Timeline for d3rk0a1:

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Domains from same chain:
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d3rk0a2